Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq120 109 2e-18 seq10 91.5 4e-13 seq464 84.2 6e-11 >seq120 Length=370717 Score = 109 bits (120), Expect = 2e-18 Identities = 255/375 (68%), Gaps = 20/375 (5%) Strand=Plus/Plus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 ||| |||| | || ||||| || ||| || || | || || |||||||||| | Sbjct 289404 GAAATTCAGGTAGCTGAAGCACGGTGCTTCTACGGCTTCCAAATAATGATGGAAAATGTT 289463 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCAC 133411 || || || || ||| || || || || |||||||| ||| ||||||| || Sbjct 289464 CACTCGGAAACTTACTCTCTACTTATCGACACCTACATCAAGGAT-----CCAGAAGAAC 289518 Query 133412 --AAAC---TATTCAACGCCATTAGCGAATT--TC-CTTGTATTAAAAAGAAATCTGACT 133463 |||| ||||| ||||||| |||| || | ||| | || ||| |||||| Sbjct 289519 GGAAACATCTATTCGACGCCAT---CGAAACCATCTCATGTGTCAAGCGTAAAGCTGACT 289575 Query 133464 GGGCTATTAAATGGATC-CAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTT 133522 ||||| ||| |||||| ||| ||| || | | ||||| || || ||||||||| Sbjct 289576 GGGCTCTTAGATGGATATCAGACCAACAGTCC-ACCTTTGCGGAACGACTTGTTGCTTTT 289634 Query 133523 GCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAAAAA 133581 || | ||||| || || |||||| ||| | || |||| ||||||||||| | || || Sbjct 289635 GCCGCTGTAGAAGGAATATTTTTCTCTGGGTCCTT-TGCTGCTATTTTTTGGATCAAGAA 289693 Query 133582 GCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACT 133641 ||||||| | | ||||| || ||| || || ||||| || | ||||| | || Sbjct 289694 GCGTGGTTTGATGCCTGGTCTCACTTTCTCCAATGAACTCATCAGTCGCGACGAAGGCCT 289753 Query 133642 TCACACCGAATTTGC 133656 |||||| || ||||| Sbjct 289754 TCACACGGATTTTGC 289768 >seq10 Length=134962 Score = 91.5 bits (100), Expect = 4e-13 Identities = 208/309 (67%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| ||||| | ||||||||||||||||| || | || || || || Sbjct 110486 TCTTCCAGCGCCTTGACGAGGCGACGCTGAATATAACCCGTCTCGGCAGTCTTAACGGCA 110427 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| | ||| |||||||| ||||||| |||||||| | || | ||| || Sbjct 110426 GTATCAATCAAACCCTCACGACCAGCCATAGCGTGGAAGAAGAATTCCTGAGGTGTCAGA 110367 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | || | || |||| || |||||||| || || || || |||| |||||| Sbjct 110366 CCACGAAGGTACGAATTCTCGACAAAACCACGAGCTTCAGGTGAGAAGTCGTCCTTGGTG 110307 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || || || || || | | | | ||| |||| || || || || || |||| Sbjct 110306 AAATGAGGGAGAGTGCGATGACGAAAACCGAATGGAATTCGACGACCTTCCACAGACTGC 110247 Query 302812 TGTCC--CAGGCACGAAATCATCTGCGAAATATTTAAATCACTG--CCCTTGGAGCCAGC 302867 || || || ||| | ||||||||| || || ||| | || |||||||| ||||| Sbjct 110246 TGGCCGACACATACGGA--CATCTGCGAGATGTT--AATGAATGAACCCTTGGAACCAGC 110191 Query 302868 ATTTACCAT 302876 | ||||| Sbjct 110190 AACCACCAT 110182 >seq464 Length=129826 Score = 84.2 bits (92), Expect = 6e-11 Identities = 161/227 (71%), Gaps = 18/227 (8%) Strand=Plus/Minus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 || || || ||||| |||||||| ||||| || ||||| |||||||||||||| ||| Sbjct 61740 CCATGGGATATCATGCAATCACGTTCCATCTCTCCGAAGCGAAGACCACCATCTCGACTT 61681 Query 251548 CTACCCTCGGCAGGCTGACGAGT-GAGATT--AACCATAGGACCGATGGAGC-GGCTA-T 251602 |||||||| |||| || | || ||||| ||| |||||| | |||| || | | Sbjct 61680 CTACCCTCTACAGGTTGCCTGGTCAAGATTTGAAC---AGGACC--TCGAGCACGCGAGT 61626 Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC--GATGAAGAT 251660 | || || | ||||||||||| | ||| |||||| ||| ||||| ||| || | Sbjct 61625 GAATTTTGTCGTCGACCATATGCTTCAAACGTTGGTAGTATGTTGGACCAAGATAAACTT 61566 Query 251661 --GCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTC 251705 ||| |||| ||||| |||||| | | | ||||||||| || Sbjct 61565 GAGCTTGAAG---TTTGC-GTCCAGTGTGCCCATGATACATAACCTC 61523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471773567356895