Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq120 100 3e-15 >seq120 Length=370717 Score = 100 bits (110), Expect = 3e-15 Identities = 204/293 (70%), Gaps = 19/293 (6%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTT-GCTAAAGGCGAGGCCGGGCATGAGGCCGCGCT 869237 ||| || || || ||||| | ||||| | |||| | || ||||||||||| || || | Sbjct 287571 ACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAG-CCGGGCATGAGACCACGTT 287629 Query 869238 TCTTGAGCCAAAAGA-TGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 869296 |||| ||||| |||| || ||| || ||| ||||| |||||||| || || || ||| Sbjct 287630 TCTTTAGCCAGAAGATTGATGCA-AAGGAGCCTGAGAAGAAGATGCCTTCCACAGCCGCA 287688 Query 869297 AAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATC 869353 || | | | ||| ||||| || || ||| | ||||| ||||||||||| Sbjct 287689 AATGCAACTAACCGTTCGGCGAA--AGTAGAG----TTCTTGTCAGAGATCCACTTCAGA 287742 Query 869354 GCCCAGTCGGCCTT---TTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410 ||||| || ||||| ||| | || | || | || |||||||| |||||||| Sbjct 287743 GCCCATTCAGCCTTCCGTTTAAT-AC--AGGGAATGGTTTCGATGGCATCAAAGAGGTAC 287799 Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || || || ||||||||| || ||||| || ||||| ||||| || || Sbjct 287800 TCGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGTTTC 287852 Score = 98.7 bits (108), Expect = 1e-14 Identities = 199/289 (69%), Gaps = 11/289 (4%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||||||||||||||| | ||| ||| || | ||| || ||||| | || |||||| Sbjct 289750 CCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAGACCAGGCATCAAACCACGCTTC 289691 Query 869240 TTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 |||| |||||| || || ||| || || |||||||| || || || || |||||||| Sbjct 289690 TTGATCCAAAAAATAGCAGCA-AAGGACCCAGAGAAAAATATTCCTTCTACAGCGGCAAA 289632 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT-TGAT--CCACTTCATCGC 869355 | | || || || ||||||||| || || | || |||| ||| | | || Sbjct 289631 AGCAACAAGTCGTTCCGCAAAGGTG--GA----CTGTTGGTCTGATATCCATCTAAGAGC 289578 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 |||||| || || | | || | | | || ||||||||| || || || | | Sbjct 289577 CCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGTCGAATAGATGTTTCCG 289518 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 ||| | || ||||||| ||||||||||| || || || || || ||| Sbjct 289517 TTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAGTTTCC 289469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106947578965195