Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq641 132 4e-26 seq666 120 3e-22 >seq641 Length=242067 Score = 132 bits (146), Expect = 4e-26 Identities = 159/212 (75%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || ||||| || || ||||| ||| | | Sbjct 74089 ATGCAGATCTTTGTCAAGACTTTGACGGGCAAGACTATAACCCTTGAAGTTGAATCTTCT 74148 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||||| |||||||| || || || ||||| ||||| Sbjct 74149 GACACGATCGATAACGTTAAGGC-GAAGATTCAAGACAAGGAGGGTATTCCTCCTGATCA 74207 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||| || || || || || |||||| | ||| | | || |||||||| Sbjct 74208 ACAACGTCTTATCTTCGCTGGCAAGCAACTTGAGGATGGGCGAACCCTCTCCGATTATAA 74267 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 || || |||||||||||||| || || |||| Sbjct 74268 TATACAGAAGGAATCGACACTGCATCTCGGTG 74299 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | | Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCATCA 73920 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| ||||| || ||||| || || ||||| ||||| Sbjct 73921 GATACCATCGACAACGTCAAGGCTAAA-ATCCAGGATAAAGAGGGTATCCCTCCTGATCA 73979 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||| || || ||||| || |||||| | | | || || || || Sbjct 73980 ACAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAA 74039 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || || ||||| || || || Sbjct 74040 CATCCAGAAAGAATCCACCCTTCA 74063 >seq666 Length=522490 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || ||| | || || || || ||||||||||| || ||| | | Sbjct 282467 ATGCAAATTTTCGTCAAGACGTTGACGGGGAAGACCATTACGCTCGAGGTTGAATCGTCG 282408 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || |||| || | ||| || || ||||| ||||| || || ||||| || Sbjct 282407 GACACAATTGATAACGTCAAGGCGAAA-ATTCAGGACAAGGAAGGCATCCCCCCCGACCA 282349 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||| ||||||||||||||||||||||| ||||| | | | || ||||| || Sbjct 282348 GCAACGCTTGATCTTTGCCGGGAAACAGCTTGAGGACGGCCGCACTCTTTCTGATTACAA 282289 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| || || ||||| || || | || |||| | ||||| || Sbjct 282288 CATTCAGAAAGAGTCGACGCTCCATCTTGTTCTGCGTCTCCGCGGTGG 282241 Score = 107 bits (118), Expect = 2e-18 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || | || || || || || || || || || || || || Sbjct 283025 ATGCAGATTTTTGTAAAGACCTTGACTGGGAAGACCATCACCCTTGAGGTGGAGTCCTCC 282966 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||||||||| || ||||| || || || || || Sbjct 282965 GATACCATCGACAATGTCAAAACCAAGATCCAAGATAAGGAAGGTATTCCCCCTGACCAG 282906 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||||||||||| ||||| |||||||| || ||| ||| | || | || ||||| | Sbjct 282905 CAACGTTTGATCTTCGCCGGAAAACAGCTCGAAGATGGTCG-TACAC-TTTCTGATTACA 282848 Query 24882 ACATTCAAAAGGAATCGACACTACA 24906 | ||||| |||||||| || || || Sbjct 282847 ATATTCAGAAGGAATCTACCCTTCA 282823 Score = 105 bits (116), Expect = 6e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || || || || || || || || ||| | || Sbjct 282747 ATGCAAATTTTTGTCAAGACTCTGACAGGAAAGACCATCACTCTTGAGGTTGAATCGTCC 282688 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| |||||||||||||| Sbjct 282687 GACACTATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATACCTCCCGATCAG 282628 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||| ||||| || || || || ||| | | | || || || || Sbjct 282627 CAACGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGTCGCACTCTCTCGGACTACAAT 282568 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGT 24912 ||||| |||||||| || || || |||||| Sbjct 282567 ATTCAGAAGGAATCCACCCTCCACCTTGGT 282538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449884468613800