Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq120 132 8e-25 >seq120 Length=370717 Score = 132 bits (146), Expect = 8e-25 Identities = 236/335 (70%), Gaps = 17/335 (5%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTT-GCTAAAGCAGAGGCCGGGCATGAGGCCGCGCT 794398 ||| || || || ||||| | ||||| | |||| || ||||||||||| || || | Sbjct 287571 ACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAG-CCGGGCATGAGACCACGTT 287629 Query 794399 TCTTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGG 794455 |||| ||||| ||||| ||| || | ||| ||||| |||||||| || || || | Sbjct 287630 TCTTTAGCCAGAAGATTGATGCAAAGGA---GCCTGAGAAGAAGATGCCTTCCACAGCCG 287686 Query 794456 CAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCG 794515 |||| | || | ||| ||||| ||| || || | | | | ||||||||||| | Sbjct 287687 CAAATGCAACTAACCGTTCGGCGAAA--GTAGAGTTCTTGTCAG-AGATCCACTTCAGAG 287743 Query 794516 CCCACTCTGCCTT---TTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGT 794572 |||| || ||||| ||| | || |||| | || |||||||| |||||||| | Sbjct 287744 CCCATTCAGCCTTCCGTTTAAT-AC--AGGGAATGGTTTCGATGGCATCAAAGAGGTACT 287800 Query 794573 CCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGA 794632 | ||| | ||||||||| ||| ||||| || ||||| || || || || || || | Sbjct 287801 CGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGTTTCGGAATGAA 287860 Query 794633 TGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||| || |||||| |||||||| || ||| Sbjct 287861 TGTTTTCCATCATGATCTGAAAGCCATAGAAACAG 287895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915998015400065