Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq666 123 2e-23 seq641 113 3e-20 seq65 87.8 1e-12 >seq666 Length=522490 Score = 123 bits (136), Expect = 2e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 |||| || | ||||||||||||||| ||||||||||| || || | | | | || || | Sbjct 282032 CCAGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGA 282091 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 ||||||| || || ||||| || ||||||||||| |||| | || |||||||| | | Sbjct 282092 GTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAA 282151 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 | || ||| ||| | |||| || | ||| || || | || || ||||||| Sbjct 282152 TCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTC 282211 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| ||||| ||||| |||||||| Sbjct 282212 CGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||| ||||||||||| || |||||||| || |||| |||| || ||| Sbjct 282542 AGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGT 282601 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||||||||||| |||||||| || | || | || |||||||| | || Sbjct 282602 TGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATC 282661 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || | || || |||| || ||||||||||| Sbjct 282662 TTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCT 282721 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||| Sbjct 282722 GTCAGAGTCTTGACAAAAATTTGCAT 282747 Score = 107 bits (118), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| || || || || || | || |||| || || || |||||||||||| Sbjct 282835 TCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCGGCGAAG 282894 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||||||||| | || | || ||||| || | || || |||||| || Sbjct 282895 ATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTTGGTTTTGAC--AT 282952 Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 | ||||| || || ||| || |||| ||| |||||||| || || | |||||| Sbjct 282953 --TGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTCTT 283010 Query 34963 TACAAAGATCTGCAT 34977 |||||| |||||||| Sbjct 283011 TACAAAAATCTGCAT 283025 >seq641 Length=242067 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| || ||||| || || ||| | ||| |||| || |||||||| || |||||| Sbjct 74279 TCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGTTGCTTGCCAGCGAAG 74220 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| || || | || | ||||||||||| | || || || ||| Sbjct 74219 ATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATCTTCGCCTTAACGTTA 74160 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | |||| ||| | || || |||| |||||| ||||| ||||| | ||||| ||| Sbjct 74159 TCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCCGTCAAAGTCTTGACA 74100 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 74099 AAGATCTGCATG 74088 Score = 107 bits (118), Expect = 1e-18 Identities = 155/217 (71%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| |||| || ||||| ||||| ||||| || || |||| |||| Sbjct 74072 AGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCC 74013 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || |||||||| || ||||| || || | || | ||||| || || Sbjct 74012 TCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCC 73953 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | ||||| |||||| |||| |||| | || | |||||| |||| ||| | Sbjct 73952 TGGATTTTAGCCTTGACGTTGTCGATGGTATC---TGAT--GACTCGACCTCAAGGGTGA 73898 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||| || || || ||||| || ||||||||||| Sbjct 73897 TAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 >seq65 Length=298600 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||||||| ||||||||||| || | || |||| Sbjct 101026 AGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCACTGAGAGTACGGCCATCC 101085 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||||||||||||||||||||||| ||||| ||||| Sbjct 101086 TCCAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGGTC 101123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325683531495365