Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq641 129 5e-25 seq666 84.2 2e-11 >seq641 Length=242067 Score = 129 bits (142), Expect = 5e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || || ||||| || || || |||||||| | | ||| || ||| || ||||| Sbjct 74292 ATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGTTG 74233 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 |||||||| | || | | ||| ||||| || ||||||||||| |||||||| ||| | Sbjct 74232 CTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTG-AATCT 74174 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | || || | || | ||||||||| ||| |||||||| |||||||| ||||| | Sbjct 74173 TCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCCG 74114 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | || || || ||||| |||||||| Sbjct 74113 TCAAAGTCTTGACAAAGATCTGCAT 74089 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | |||||| ||||||||||| || ||||| || || | | ||||| | Sbjct 74075 CGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCA 74016 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || |||||||||||||| || | || | | ||| ||||| || || ||||||||||| Sbjct 74015 TCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTA 73956 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| ||||| | || | || || || || || ||||| || ||| Sbjct 73955 TCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATA 73896 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | || || || || |||||||| Sbjct 73895 GTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 >seq666 Length=522490 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||| | ||||||||| || ||||||||||| || | || ||||| Sbjct 283038 ACGGAGCACAAGATGCAACGTGGATTCCTTCTGAATGTTATAGTCGGAAAGCGTGCGGCC 283097 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAAT 29681 ||| ||||||||||| |||||| | || | | |||||| || || ||||| Sbjct 283098 ATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGCTGGTCGGGAGGAAT 283148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385208237504235