Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq510 114 1e-19 seq10 100 2e-15 >seq510 Length=242540 Score = 114 bits (126), Expect = 1e-19 Identities = 195/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| ||||||||||||||||| ||||| | |||| || | ||||| | || Sbjct 80853 ACGAGACGGTTATCAAAATCTTCACCACCCAAGTGGGTATCACCGGCGGTAGCCTTGACC 80794 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||||| || ||||| | | | ||| | ||||||| |||||| ||||| | ||| Sbjct 80793 TCGAAAATACCTTCTTCGATGGTGAGAAGTGAAACATCAAAGGTTCCTCCACCAAGATCG 80734 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || | ||||| ||| | || || || || ||||| |||| || ||| Sbjct 80733 AAGATCAAAACATTGCGCTCTCCGGTCACCTTCTTGTCGAGGCCATAAGCAATGGCGGCA 80674 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 || ||||| ||||| || || | | || || ||||| | ||| | || || || || Sbjct 80673 GCTGTTGGCTCATTGATGATACGGAGGACGTTGAGACCGGAAATGGTGCCAGCGTCCTTG 80614 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 282464 || ||||| | || || ||||| || || || ||||| |||| Sbjct 80613 GTAGCTTGACGCTGCGAGTCGTTGAAGTAGGCGGGAACGGTAA 80571 >seq10 Length=134962 Score = 100 bits (110), Expect = 2e-15 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 432280 GATTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGT 432339 || ||| ||||||||||||||| | | || ||||||||||||||||||||||| | | Sbjct 108609 GACTGAAGGGTAAAGAAGGTCGTCTGCGTGGCAATTTGATGGGAAAGCGTGTCGACTTTT 108668 Query 432340 CTGCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 |||| ||||| ||||| || |||||||||| | | ||| | || || |||||||| Sbjct 108669 CTGCGCGTACGGTTATCACAGGTGATCCTAATTTGGAGCTCGACGAGGTCGGTGTTCC 108726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740515761367710