Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq666 100 3e-16 seq641 93.3 4e-14 >seq666 Length=522490 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||||| ||| | ||| | || || ||||| || ||||||||||| Sbjct 282241 CCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAA 282300 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||| || || ||||| || ||| |||||| |||||||| ||||| || Sbjct 282301 AGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGG 282360 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 |||||||| ||||| |||||| || | | || | ||||| | | ||| || Sbjct 282361 ATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACC 282420 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | ||||| || ||||| || || ||||| ||||||||| Sbjct 282421 TCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCATA 282468 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 137221 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 137280 || || |||||||| || ||| | || ||| |||||||||||| || || ||| || Sbjct 282049 TCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGAGTTGCTTGCCCGCAAAG 282108 Query 137281 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 137340 || || |||||||| || || || || ||||| ||||| ||| || ||| | | Sbjct 282109 ATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAATCTTCGCTTTCACGTTG 282168 Query 137341 TCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 137400 || | |||||| | | || ||||| | || | |||||| ||||| | || || || Sbjct 282169 TCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTCCGGTGAGCGTCTTCACA 282228 Query 137401 AATATTTGCATA 137412 || || |||||| Sbjct 282229 AAAATCTGCATA 282240 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| ||||| || || || |||||| |||||||||||||||||||| ||||| ||| Sbjct 282593 TCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTG 282652 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | ||||| | | ||| || |||| ||| | Sbjct 282653 TCCTGAATCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATG 282712 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||| || |||| || || || || ||||||||| Sbjct 282713 GTCTTTCCTGTCAGAGTCTTGACAAAAATTTGCATA 282748 >seq641 Length=242067 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 |||||| || | || | || | ||||| || |||||||| || |||||||| ||| Sbjct 74088 GCCTCCACGGAGGCGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 74029 Query 137244 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | |||| || | || ||||||||||| || || |||| |||||||| ||||| |||| Sbjct 74028 GAGAGTGCGTCCA-TCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAG 73970 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | || || ||||| || ||||| || | | || | || |||| | || | Sbjct 73969 GGATACCCTCTTTATCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGA 73910 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 | |||| || | |||||||| |||| || || ||||| || |||||| Sbjct 73909 CCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATA 73860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488529740622000