Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq666 100 3e-16 seq120 89.7 5e-13 >seq666 Length=522490 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| || ||||| |||||||| || | ||| ||| | || || || ||||||| Sbjct 282550 GGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCA-TCTTCAAGTTGCTTGC 282608 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | || ||||| |||||||| || ||||||||||| ||||| || Sbjct 282609 CGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATCTTGGCCT 282668 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||||| | || || || | |||| ||| || || ||||||| Sbjct 282669 TGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAG 282728 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||| ||||| Sbjct 282729 TCTTGACAAAAATTTGCAT 282747 Score = 100 bits (110), Expect = 3e-16 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGC 133514 ||| | ||| || || ||||| ||||||||||| | ||| |||| || |||||| Sbjct 282822 ATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAA--GTGTACGACCATCTTCGAGC 282879 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || ||| | || | || |||||||| || || || |||||||| || |||| Sbjct 282880 TGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATC 282939 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | || | || |||| || |||||| || | ||||| ||| || || Sbjct 282940 TTGGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCA 282999 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || ||||| ||||||||||| Sbjct 283000 GTCAAGGTCTTTACAAAAATCTGCAT 283025 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||| ||| |||||||| || || ||| | ||| | ||| ||||| || Sbjct 282036 ATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGAGTTG 282095 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||||||||| | || || || |||||||| || || || ||||||||||| ||||| Sbjct 282096 CTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAATCTT 282155 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | | |||| |||||| | | |||||| || | || | || || ||||| Sbjct 282156 CGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTCCGGT 282215 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||||||||| Sbjct 282216 GAGCGTCTTCACAAAAATCTGCAT 282239 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||||||||| || |||||||| | ||| |||||| ||||| || || Sbjct 282271 GTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGTTTCCCG 282330 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CTT 133582 || | || | || ||||||||||| ||||||||||||||||| ||| ||| | ||| Sbjct 282331 GCAAAGATCAAGCGTTGCTGGTCGGGGGGGATGCCTTCCTTGTC-CTGAATTTTCGCCTT 282389 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | | || || |||| || | ||| || || |||| || Sbjct 282390 GACGTTATCAATTGTGTCCGACGATTCAACCTCGAGCGTAATGGTCTTCCCCGTCAACGT 282449 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 282450 CTTGACGAAAATTTGCAT 282467 >seq120 Length=370717 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||| ||||||| ||||| || || || |||||||| || ||| Sbjct 287548 AGGCATGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTC 287607 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 | ||||||||||| || |||| | |||| || | |||||| ||| || ||| Sbjct 287608 AAGCCGGGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAG 287667 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || | ||| ||||| ||||| || || | || ||||| || || | ||||| Sbjct 287668 AAGATGCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCA 287727 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTT 120848 ||||||||||| ||||| || ||||| Sbjct 287728 GAGATCCACTTCAGAGCCCATTCAGCCTT 287756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483406690155400