Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq666 100 2e-16 seq641 86.0 4e-12 >seq666 Length=522490 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || || |||||||| || ||||| || | || || | ||||||||||| || Sbjct 282835 TCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCGGCGAAG 282894 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 |||||||| ||||| || | || | |||||| || || || || |||| |||| Sbjct 282895 ATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTT-GGTTTTGACATT 282953 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | ||| ||| || ||||| |||| ||||| || || || || || || ||||| Sbjct 282954 GTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTCTTTAC 283013 Query 33738 AAAGATCTGCAT 33749 ||| |||||||| Sbjct 283014 AAAAATCTGCAT 283025 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || || |||||| || ||||||||||| || Sbjct 282240 ACCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGA 282299 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | ||||| |||||||| ||||| || ||||| || | || Sbjct 282300 AAGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGG 282359 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||||||| || | || | ||||| ||||| || Sbjct 282360 GATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAAC 282419 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||| || || || || || ||||| || || || || |||||| Sbjct 282420 CTCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCATA 282468 >seq641 Length=242067 Score = 86.0 bits (94), Expect = 4e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||||| || |||||||| |||||||| |||||| | || || | ||| Sbjct 74064 ATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCCTCGAGTTG 74005 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| || || || || | ||| || ||||| | || | ||| ||||| || ||||| Sbjct 74004 TTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCCTGGATTTT 73945 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || | | | ||| | ||| || ||| || || |||| ||||| || || || | Sbjct 73944 AGCCTTGA-CGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTCTTGCCAG 73886 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | | || || || |||||||||||| Sbjct 73885 TCAGAGTCTTGACGAAGATCTGCATA 73860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328694645803200