Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq666 96.9 3e-15 seq641 96.9 3e-15 >seq666 Length=522490 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || | || ||||| | ||||| | || || ||| | | Sbjct 282747 ATGCAAATTTTTGTCAAGACTCTGACAGGAAAGACCATCACTCTTGAGGTTGAATCGTCC 282688 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || || || ||| || || || |||||||| ||||||||| Sbjct 282687 GACACTATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATACCTCCCGATCAG 282628 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | || |||||| ||||| ||||||| | | | | || || |||||| Sbjct 282627 CAACGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGTCGCACTCTCTCGGACTACAAT 282568 Query 25355 ATTCAAAAAGAATCCACC 25372 ||||| || ||||||||| Sbjct 282567 ATTCAGAAGGAATCCACC 282550 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | |||||||| || || || || || | ||||| | || || || || | Sbjct 283025 ATGCAGATTTTTGTAAAGACCTTGACTGGGAAGACCATCACCCTTGAGGTGGAGTCCTCC 282966 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || ||| || || ||||| || ||||| || || || ||| Sbjct 282965 GATACCATCGACAATGTCAAAACCAAGATCCAAGATAAGGAAGGTATTCCCCCTGACCAG 282906 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | | || | || ||| ||||| |||||||||| | | | | ||||||||| Sbjct 282905 CAACGTTTGATCTTCGCCGGAAAACAGCTCGAAGATGGTCGTACACTTTCTGATTACAAT 282846 Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378 ||||| || ||||| ||| ||||| Sbjct 282845 ATTCAGAAGGAATCTACCCTTCAT 282822 >seq641 Length=242067 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || || || || | || || || | ||||| | || ||||| | || | Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGA-GTCATC 73919 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||| ||||| | || || ||||| |||||||||||||| || || ||||| Sbjct 73920 AGATACCATCGACAACGTCAAGGCTAAAATCCAGGATAAAGAGGGTATCCCTCCTGATCA 73979 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| | ||||| | || |||||||||||||| |||| | | | || ||| ||||| Sbjct 73980 ACAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAA 74039 Query 25354 TATTCAAAAAGAATCCACCATTCAT 25378 || || |||||||||||| ||||| Sbjct 74040 CATCCAGAAAGAATCCACCCTTCAT 74064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445081408807200