Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq666 152 5e-32 seq641 107 2e-18 >seq666 Length=522490 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || || || ||||| || || || ||||||||||| || | Sbjct 282241 CCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAA 282300 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || |||||||| || ||||| ||||| || ||||| ||||| || Sbjct 282301 AGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGG 282360 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || |||||||| ||||| || | |||||| |||||||| || Sbjct 282361 ATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACC 282420 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| |||||||| || || || || || || |||||||||||||| Sbjct 282421 TCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 138 bits (152), Expect = 1e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||||||||||| ||||| |||||||| | ||| || || || || Sbjct 282542 AGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGT 282601 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || ||||| || ||||||||||| ||||| ||||| || || ||||| Sbjct 282602 TGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATC 282661 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| || | |||||||||||||| || || ||||| ||||| || || Sbjct 282662 TTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCT 282721 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || ||||||||||| Sbjct 282722 GTCAGAGTCTTGACAAAAATTTGCAT 282747 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || || || |||||||| ||||| ||||| || || || || || |||| Sbjct 282818 CGAGATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGA 282877 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 ||||||| || || || |||||||| ||||| || || || || ||||| || ||||| | Sbjct 282878 GCTGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGA 282937 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || |||||| ||| | || ||||| || ||||| || || || ||||| || | Sbjct 282938 TCTTGGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCC 282997 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || || || ||||| |||||| Sbjct 282998 CAGTCAAGGTCTTTACAAAAATCTGCATT 283026 >seq641 Length=242067 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | ||||| || || |||||||| || || |||||||||||| Sbjct 74087 CCTCCACGGAGGCGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 74028 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||| ||||||||||| || || | ||| || ||||| || || Sbjct 74027 AGAGTGCGTCCATCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGG 73968 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| || || ||||| ||||| ||| | || || || || || || Sbjct 73967 ATACCCTCTTTATCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACC 73908 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | ||| || ||||| || ||||| Sbjct 73907 TCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505383648684200