Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq120 172 8e-38 >seq120 Length=370717 Score = 172 bits (190), Expect = 8e-38 Identities = 366/543 (67%), Gaps = 20/543 (4%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 |||||||| | || || | ||||| || || || | || ||||| |||||||| || Sbjct 287572 CCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCGGGCATGAGACCACGTTTC 287631 Query 39698 TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAAT 39757 || ||||| || || | ||||| || || || |||||||||||||| || || |||||| Sbjct 287632 TTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATGCCTTCCACAGCCGCAAAT 287691 Query 39758 GCAACAAGTCTCTCTCCGTAACTTG---TATCATTATGTATCCACTTCTGTGCCCAATCA 39814 ||||| | | || || || | | | | | | ||||||||| | ||||| ||| Sbjct 287692 GCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCAGAGATCCACTTCAGAGCCCATTCA 287751 Query 39815 GCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCA 39874 || ||| || | ||| || || ||||| || |||| |||||| || | ||| | Sbjct 287752 GCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATCAAAGAGGTACTCGCGCTCAGCT 287811 Query 39875 CTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATC 39934 || || | || || ||||| | ||| ||| |||| ||||| |||||||| ||| Sbjct 287812 TGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGTTTCGGAATGAATGTTTTCCATC 287871 Query 39935 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC--TGAACAAAATC 39992 |||||||| || || ||||| | ||||||| || || || || | || | Sbjct 287872 ATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTGCCTGGACTTCATTGGAGAAGCGC 287931 Query 39993 TTTCCGCCAA-ATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGT 40051 | || ||| ||||| || || || ||||| ||| |||||||| ||||| || || Sbjct 287932 T---CGACAAGGTTTTCGTTGACAATGCCATCGGAAGCAGCAAAAAAAGCCAAAACGTGC 287988 Query 40052 TTAATAAAATATTTTTCATCGGGTGTCA-------ATTTATTCCAGTCATTGATATCTTT 40104 ||||| | |||| ||||| || |||||| || | | || || Sbjct 287989 GAGATAAAGTGGCGCTCAT----TGTCATTGAGGCGTTCATTCCAATCGTAAAGGTCCTT 288044 Query 40105 TGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCA 40164 || | ||| | || ||||| ||||| || || || ||||||||||||||||| | ||| Sbjct 288045 GGAAAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACATTTGCCA 288104 Query 40165 TAT 40167 ||| Sbjct 288105 TAT 288107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686888750849400