Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq641 104 2e-17 seq666 87.8 2e-12 >seq641 Length=242067 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| || | || | || | ||| | || || ||||| || || ||||||||| Sbjct 74089 TGCCTCCACGGAGGCGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGG 74030 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | |||| | || ||||| ||||| || ||| | |||||||| |||||||| || | Sbjct 74029 AGAGAGTGCGTCCATCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAG 73970 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | |||||||||||| ||| || || | | | || | || |||| | || | Sbjct 73969 GGATACCCTCTTTATCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGA 73910 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || |||| ||||| |||||||| || || ||||| |||||| Sbjct 73909 CCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATA 73860 >seq666 Length=522490 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || |||||||||||||| | |||| | ||||| || || || ||| Sbjct 282551 GTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGTTGCTTGCCG 282610 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | || || ||||| || || | ||| || || || |||||| || Sbjct 282611 GCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATCTTGGCCTTG 282670 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | |||||| | | |||||| || ||||| || | || || |||||||| Sbjct 282671 ACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAGTC 282730 Query 27231 TTCACAAAGATTTGCATA 27248 || ||||| ||||||||| Sbjct 282731 TTGACAAAAATTTGCATA 282748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424922307296520