Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq654 138 1e-27 seq120 132 6e-26 >seq654 Length=437428 Score = 138 bits (152), Expect = 1e-27 Identities = 409/624 (66%), Gaps = 10/624 (2%) Strand=Plus/Plus Query 110718 TTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCA 110777 ||||||| ||||| ||||| ||||| ||||||||| || ||| ||||| || |||| Sbjct 46918 TTGTGTAGGGTTCGAAGCACTCATTGAAACCCAAGATCTGACTGGTCGAGGCAGTGGGCA 46977 Query 110778 TTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT-GATGCGTTCCTTGAGAACA 110836 | || || || || || |||||||| | || | ||| |||||||| Sbjct 46978 TAGGAGCACACAGCAGGGAATTGCGAAGACCAGT-TCGTGCGATCTTCTCCTTGAGCGAG 47036 Query 110837 TCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGG 110896 ||||||| | | ||| | || |||| | ||| ||||| |||| ||||| Sbjct 47037 GCCCAGTCCCACAAGCCGGTGGGGGTAACTCCCCAAAGGTCGAACTGGAGCAATCCTTGC 47096 Query 110897 GACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 110956 ||||| ||| ||||| |||| ||||| | |||| || |||| || || Sbjct 47097 GACGCAGGACTACCCTGGTAGGTCTCATACGGTCCTTCTTTCTCCGCCATCTCGGTACTA 47156 Query 110957 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 111016 ||||||| | ||||| || ||||| || ||||| || || | ||||||||| | Sbjct 47157 GCCTCCAAAGCCGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTCCTTGGCGGCC 47216 Query 111017 TCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAA 111075 || || || | | | ||| || || || |||| ||||||||||| ||||| | Sbjct 47217 GGAGAGTCGAAGG-GCATGTGCAAAATCATGAAAGCATCAGCGAGACCTTGCACACCGAC 47275 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 111135 ||||||||| | ||| ||||| || || || || || || ||| |||| Sbjct 47276 ACCAATAGGACGGTGACGCATGTTCGAGCGACGGGCTTCGGGGACAGGGTAATAATTGAC 47335 Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 111195 ||||||| || || | ||| | | |||| ||| || | || || ||||| | | Sbjct 47336 ATCAATGATACGATTCAAATTGTAAGCGACAACCTTGGTAACATCGTGGAGTTTCTGGAA 47395 Query 111196 ATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCA 111255 |||| | || | ||| |||| | || |||||||||| || ||||||||||| Sbjct 47396 ATCATA-----GACACCATTC-TTGATAAACGAAGGAAGGGCGAGAGAAGCCAAATTGCA 47449 Query 111256 AACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTT 111315 || || || ||||| | |||||| | ||||| || || | ||| ||| ||| Sbjct 47450 GACGGCAGTTTCATCTGGTGACGAGTACTCAATGATTTCCGTGCACAGGTTAGAAGACTT 47509 Query 111316 AATCGTCCCCAAATTCTTTTGGTT 111339 || ||||| | ||||||||||| Sbjct 47510 GATGGTCCCAAGGTTCTTTTGGTT 47533 Score = 89.7 bits (98), Expect = 6e-13 Identities = 171/252 (68%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 111823 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 111882 |||||||| | ||||| || ||||| ||| ||| |||||| | | | || || Sbjct 48175 ATGGATGTTGAGGCCAATGCCTCCAGCAGTCTTGCTGATCATCGCACATTGCTTGAGGGT 48234 Query 111883 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 111942 |||| ||||| | ||||| || ||||| || | |||||| || | | || Sbjct 48235 ATCATAAATACCATCAATTGAATCATCCTTCATGCAAACAAGGAAACACGAGCTGAGTTG 48294 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGA 112002 || |||||||||||||||||||| || || | ||||| |||| | | || Sbjct 48295 TGGATGAGGTGTACCAGCATTGAAGAGAGTAGGCGAAGCGTGTGTGAAGTAGCGCTCAGA 48354 Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062 |||| | || ||||| |||||| |||||||| || || || ||||| | |||||| Sbjct 48355 CATCAGATTATACGTCTCTAAGACACGTTCAATGTCATCGCCATGAATGCCAACTGCGAC 48414 Query 112063 CCGCATGAACAT 112074 ||||||| ||| Sbjct 48415 ACGCATGATCAT 48426 >seq120 Length=370717 Score = 132 bits (146), Expect = 6e-26 Identities = 352/525 (67%), Gaps = 17/525 (3%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||||||||| ||| ||||| || |||||||| | || Sbjct 287554 GCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCG 287613 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| || ||||| | ||| | || | ||| || || || ||||||||||| Sbjct 287614 GGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCA-AAGGAGCCTGAGAAGAAGAT 287672 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCG-AAGGAGCGAGACTTTGCATCAA 122836 || |||||| |||||| |||| | ||||||||| ||| || | ||| || | Sbjct 287673 GCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAGAG-TTCTTGTCAGAGA 287731 Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896 ||| |||| ||||||| |||||| | |||||| || | |||| |||||| |||| Sbjct 287732 TCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATCAA 287791 Query 122897 ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTT 122956 | | | || |||| | ||||| ||||| |||| || | |||||||||| Sbjct 287792 AGAGGTACTCGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGTTT 287851 Query 122957 CGCCATGAACCATTT-CATTATGGCAT-TGATATGCGTAGAATGAGCGCGCTTCGCTTAT 123014 || ||||| ||| ||| ||| || ||| | | ||||| |||| ||||| | Sbjct 287852 CGGAATGAATGTTTTCCATCATG--ATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTGC 287909 Query 123015 CTGAACCTCATCCGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCC 123071 ||| || |||| | || | | || | || || ||||| |||||||| | Sbjct 287910 CTGGACTTCATTGGAGAA---GCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGC 287966 Query 123072 AGCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAGG-GT--CTT 123128 |||||| || |||| | || | || || | ||||| ||||| ||| || || Sbjct 287967 AGCAAAAAAAGCCAAAACGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATT 288026 Query 123129 CCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||| |||| ||| || ||||| | ||| | || || || ||||| Sbjct 288027 CCAATCGTAAAGGTCCTTGGAAAGATCCATCTCCTCAGCCGTCCA 288071 Score = 131 bits (144), Expect = 2e-25 Identities = 298/440 (68%), Gaps = 14/440 (3%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| ||| ||| || || || || || || |||||||| ||||| ||||| Sbjct 289768 GCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAGACCA 289709 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 ||||| | ||| |||||||| | |||| ||||||| ||| || ||||| ||||| || || Sbjct 289708 GGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCA-AAGGACCCAGAGAAAAATAT 289650 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA 122837 || || ||| ||||| |||| ||| ||||| || |||| | || || | | | | Sbjct 289649 TCCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCAAAGGTG-GACTGTTGGTCTGATA 289591 Query 122838 -CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896 |||| | | ||||| | || || || | ||||| | |||| |||||| || | Sbjct 289590 TCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGTCGA 289531 Query 122897 ATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTT 122956 ||| || ||| ||| | |||||| ||||| |||| || | | || || |||| Sbjct 289530 ATAGATGTTTCCGTTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAGTTT 289471 Query 122957 CGCCATGAACCATTTC----ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTT 123012 | ||||| |||| ||||| ||| | ||||||| | || ||||| | Sbjct 289470 CCGAGTGAACATTTTCCATCATTAT----TTGGAAGCCGTAGAAGCACCGTGCTTCAGCT 289415 Query 123013 ATCTGAACCTCATCCGCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCC 123071 | ||||| ||| | | | ||| ||| | || |||||| ||||| || ||||| | Sbjct 289414 ACCTGAATTTCA-CTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAAGC 289356 Query 123072 AGCAAAGAATGCCAGGATGT 123091 |||||||||||| |||| || Sbjct 289355 AGCAAAGAATGCGAGGACGT 289336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628013669316000