Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq120 150 2e-31 seq654 145 9e-30 >seq120 Length=370717 Score = 150 bits (166), Expect = 2e-31 Identities = 355/526 (67%), Gaps = 19/526 (4%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||| |||||| ||| || || || ||||| || || Sbjct 287554 GCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCG 287613 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| || ||||| | |||||| || | ||| ||||| ||||||||||| Sbjct 287614 GGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATG 287673 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATCA-- 130192 || |||||| ||| || |||| | || || || |||| | || || | ||| Sbjct 287674 CCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTA----GAGTTCTTGTCAGA 287729 Query 130193 -AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 130251 | |||||||| ||||| | ||||| | ||||| || | ||| | ||| || || Sbjct 287730 GATCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATC 287789 Query 130252 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 130311 |||||| | || || | | | || |||||||| | ||||| || |||||||| Sbjct 287790 AAAGAGGTACTCGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGT 287849 Query 130312 TTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 130370 |||| ||| | ||| ||| || | |||| | | |||||| |||| ||||| | Sbjct 287850 TTCGGAATGAATGTTTTCCATCAT-GATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTG 287908 Query 130371 TCTGTACCTCATCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACC 130427 ||| || |||| || | || | | || | || || ||||| |||||||| Sbjct 287909 CCTGGACTTCAT-TGGAGAA--GCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAG 287965 Query 130428 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG-GT--CT 130484 |||||||||| |||| | | | || || | | ||||| || || ||| || | Sbjct 287966 CAGCAAAAAAAGCCAAAACGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCAT 288025 Query 130485 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||| |||| ||| ||||| || ||||| | |||||| || ||||| Sbjct 288026 TCCAATCGTAAAGGTCCTTGGAAAGATCCATCTCCTCAGCCGTCCA 288071 Score = 129 bits (142), Expect = 7e-25 Identities = 350/528 (66%), Gaps = 21/528 (4%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| ||| ||| || || ||||| || |||||||||||| ||||| ||||| Sbjct 289768 GCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAGACCA 289709 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | ||| |||||||| | ||| ||||| ||| ||| || |||||||| || || Sbjct 289708 GGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAAAAATATT 289649 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGAC--TTTGTATCA- 130192 || || ||| || || |||| || || || ||||||| |||| || || | | Sbjct 289648 CCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCAAAGG---TGGACTGTTGGTCTGAT 289592 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| | | ||||| | || || || || ||| | || ||| | ||| || || Sbjct 289591 ATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGTCG 289532 Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312 || || | ||| |||| |||||| |||||||| | || || ||| || || ||| Sbjct 289531 AATAGATGTTTCCGTTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAGTT 289472 Query 130313 TCGCCATGGACCATT-----TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 130367 || | | || |||| ||||||| || | ||||||| | || ||||| Sbjct 289471 TC-CGAGTGAACATTTTCCATCATTAT----TTGGAAGCCGTAGAAGCACCGTGCTTCAG 289417 Query 130368 TTATCTGTACCTCATCTGCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGAC 130426 || ||| | ||| ||| | ||| ||| | || |||||| ||||| || ||||| Sbjct 289416 CTACCTGAATTTCA-CTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAA 289358 Query 130427 CCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGT---C 130483 ||||||| || || |||| | ||||| | | |||| | ||| || | Sbjct 289357 GCAGCAAAGAATGCGAGGACGTGAGAGATGAAATACCGTTCGCTGGAGTTGAGCTTATGA 289298 Query 130484 TTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 ||||| || ||||| | ||||||||| ||||| || |||||| Sbjct 289297 TTCCAATCCATGAGATCGTGGCAGAGATCTATTTCCTCTGCGGTCCAA 289250 >seq654 Length=437428 Score = 145 bits (160), Expect = 9e-30 Identities = 579/910 (64%), Gaps = 71/910 (8%) Strand=Plus/Plus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| || || |||||||||||| ||||||||| || || ||||| |||||||| Sbjct 46920 GTGTAGGGTTCGAAGCACTCATTGAAACCCAAGATCTGACTGGTCGAGGCAGTGGGCATA 46979 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || || ||| || || ||||| || || |||||||| | | || Sbjct 46980 GGAGCACACAGCAGGGAATTGCGAAGACCAGTTCGTGCGATCTTCTCCTTGAGCGAGGCC 47039 Query 118314 CAGTCGTAGTTGA-GCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 118372 ||||| | | | | | | | | ||| | || |||||||| | ||||| || Sbjct 47040 CAGTCCCACAAGCCGGTGGGGGTAACTCC-CCAAAGGTCGAACTGGAGCAATCCTTGCGA 47098 Query 118373 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 118432 ||| || |||| | |||||||| || || || |||||||| |||| || || Sbjct 47099 CGCAGGACTACCCTGGTAGGTCTCATACGGTCCTTCTTTCTCCGCCATCTCGGTACTAGC 47158 Query 118433 CTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 118492 ||| | || ||||| || || || || || || || || | ||||||| | Sbjct 47159 CTCCAAAGCCGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTCCTTGGCGGCCGG 47218 Query 118493 GGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGC 118551 || || || | | | ||| || || || |||| ||||||||||| ||||||| | Sbjct 47219 AGAGTCGAAGGGCA-TGTGCAAAATCATGAAAGCATCAGCGAGACCTTGCACACCGACAC 47277 Query 118552 CAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC----ACGGGATAAAAATTC 118607 |||| || || || | ||| || || ||| ||| || | || || ||| |||| Sbjct 47278 CAATAGGACGGTGACGCATGTTCGAG---CGA-CGGGCTTCGGGGACAGGGTAATAATTG 47333 Query 118608 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 118667 ||| || | | ||| | ||| | | ||||||||| || | || || || || | | Sbjct 47334 ACATCAATGATACGATTCAAATTGTAAGCGACAACCTTGGTAACATCGTGGAGTTTCTGG 47393 Query 118668 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 118727 ||||| | || | ||| |||| | || ||||||||||| || |||| ||| Sbjct 47394 AAATCATA-----GACACCATTC-TTGATAAACGAAGGAAGGGCGAGAGAAGCCAAATTG 47447 Query 118728 CACACAGAGGTCTCATCCTTATCA-GTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786 || || | || |||| || | | | |||||| || ||||||||||||| ||| ||| Sbjct 47448 CAGACGGCAGTTTCAT-CTGGTGACGAGTACTCAATGATTTCCGTGCACAGGTTAGAAGA 47506 Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTT---TG---------------------- 118821 ||| ||||| || | ||||||||| || || || || Sbjct 47507 CTTGATGGTCCCAAGGTTCTTTTGGTTGGATTTACCTGCGGGGACATGAATGGTTGACCA 47566 Query 118822 ---------TGTTA---------CAC--------GCATCCTTGTAAAGCATGTATGGCGT 118855 || || ||| ||||||||||||||||| |||| Sbjct 47567 AAAGAATCATGATAATCAGTACCCACTGTTGGCGGCATCCTTGTAAAGCATAAATGGTCC 47626 Query 118856 CCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGC 118915 || ||||| |||||| || |||||| || | ||| | | ||| || ||||| Sbjct 47627 TCCAGTCTCGATTTGGGCCTCGAGAATCGCATACCAAAGTTTCTGAGCAGGAACAGTCTT 47686 Query 118916 GTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGC 118975 || || || || | ||||||||| ||| | ||||| ||||||||||| || | Sbjct 47687 CTTAGCACGTTTTTCGTTCTCGTACTTCGTGAACAGGGCCTCAAACTCTTCGCCATGAAC 47746 Query 118976 CTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAAC 119035 || | || ||||| || | | |||||||| || | ||| | ||||||| ||||||| Sbjct 47747 ATCAGCAAGTCCTGGGGCTTCGTTGGGGCAGAAAAGTGGCCAGTCACCACCCGCCTCAAC 47806 Query 119036 CCGCTTCATG 119045 ||||||||| Sbjct 47807 GCGCTTCATG 47816 Score = 96.9 bits (106), Expect = 4e-15 Identities = 190/280 (68%), Gaps = 1/280 (0%) Strand=Plus/Plus Query 117787 CACACTCGGGTTCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGT 117846 ||| ||| ||| | || |||||||||||| | || | | | | |||||||||| Sbjct 46459 CACGCTCTGGTCGACGG-TGAACTGAATGGCTTGAGCAGCAGGCCTCGTGCGGAGGTAGT 46517 Query 117847 ACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGA 117906 |||| ||||||||||| |||| ||||||| |||| | ||||| | || || | || Sbjct 46518 ACATTCCCGTCTTGAGACCCTTCTTCCAGCCATAGAAGTGCATGCTTGTCAGCTGGCCGA 46577 Query 117907 GGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGAT 117966 | || || || || | || ||||| ||||||| || ||| ||| || |||| Sbjct 46578 GAGTCGGGGCTTGCAAGTGGACGTTCAAACTTTGGCTCTGGCAGATAAAGGCCCCACGAT 46637 Query 117967 CCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCT 118026 | || || | || || || | |||| |||| ||||| |||||| |||||| || Sbjct 46638 CAGCAGCGAGGTCGATAACTTTCTTCTGGCTGATCTCCCAGACAGTCTTGTAGATTGCCT 46697 Query 118027 TAATATCATCTGGGATATCCACGATATTTTGGATGGATCC 118066 | | ||||| |||||| ||| || || ||||| || Sbjct 46698 TGACGTCATCAGGGATACTTGGGATGTTCTGAATGGAACC 46737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618417149422600