Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq120 143 3e-29 seq654 132 6e-26 seq444 113 5e-20 >seq120 Length=370717 Score = 143 bits (158), Expect = 3e-29 Identities = 351/523 (67%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAG--ACTC-TAAAT 94497 ||||| ||||| ||| | ||||| || ||||| | |||||||||| || | | ||| Sbjct 288071 TGGACGGCTGAGGAGATGGATCTTTCCAAGGACCTTTACGATTGGAATGAACGCCTCAAT 288012 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || ||||| | || || || | |||| || ||||||| |||||||| ||| Sbjct 288011 GACAATGAGCGCCACTTTATCTCGCACGTTTTGGCTTTTTTTGCTGCTTCCGATGGCATT 287952 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCC 94617 || || || | | ||| | |||| || || | ||||||| | | Sbjct 287951 GTCAACGAAAACCTTGTCGAGCGCTTCTCCAATGAAGTCCAGGCAGCTGAAGCTCGCTGT 287892 Query 94618 TTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCAT 94676 ||||||| | |||| |||| ||| ||| | ||| || ||||| | || || Sbjct 287891 TTCTATGGCTTTCAGA-TCATGATGGAAAACATTCATTCCGAAACATATTCTCTCCTTAT 287833 Query 94677 AGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGT 94736 ||||| || || ||||| |||||| || | |||||||| |||||| |||| | Sbjct 287832 AGACACTTACATCAAGGACCAAGCTGAGCGCGAGTACCTCTTTGATGCCATCGAAACCAT 287773 Query 94737 TCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTCGCG 94793 ||| |||||| || ||| || || |||||| |||||||| | ||| | || || Sbjct 287772 TCCCTGTATTAAACGGAAGGCTGAATGGGCTCTGAAGTGGATCTCTGACAAGAACTC--- 287716 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 | | || || || || | | ||||||||| ||| || || ||||||||||| || || Sbjct 287715 TACTTTCGCCGAACGGTTAGTTGCATTTGCGGCTGTGGAAGGCATCTTCTTCTCAGGCTC 287656 Query 94854 CTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 ||| ||| | || | ||||| ||||| || ||||||||||| || | ||||| | Sbjct 287655 CTT-TGCATCAATCTTCTGGCTAAAGAAACGTGGTCTCATGCCCGGCTTGACTTTCTCAA 287597 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||| ||||| ||||| | ||| || ||||| Sbjct 287596 ACGAGCTTATCAGCCGTGATGAGGGTATGCACACCGACTTTGC 287554 >seq654 Length=437428 Score = 132 bits (146), Expect = 6e-26 Identities = 316/473 (67%), Gaps = 6/473 (1%) Strand=Plus/Minus Query 105116 AAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAAT 105175 ||||||||||| ||||| || |||| | | || | || | | |||||| ||| Sbjct 47389 AAACTCCACGATGTTACCAAGGTTGTCGCTTACAATTTGAATCGTATCATTGATGTCAAT 47330 Query 105176 TTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 | |||||| || || ||| || || ||| | |||||||| |||||| ||||| Sbjct 47329 TATTACCCTGTCCCCGAAGCCCGTCGCTCGAACATGCGTCACCGTCCTATTGGTGTCGGT 47270 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCG 105295 || || |||||||| |||| ||||| ||| | | | || || || | || Sbjct 47269 GTGCAAGGTCTCGCTGATGCTTTCATGATTTTGCACATGCCCTTCGACTCTCCGGCCGCC 47210 Query 105296 AAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCA 105355 ||||| |||| | || || |||||||| || ||||| ||| | ||||| ||| | Sbjct 47209 AAGGAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCGGCTTTGGAGGCTAGTACC 47150 Query 105356 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 105415 ||| |||| ||| || || || ||||| |||| ||||| ||| || || ||||| Sbjct 47149 GAGATGGCGGAGAAAGAAGGACCGTATGAGACCTACCAGGGTAGTCCTGCGTCGCAAGGA 47090 Query 105416 GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA--GCTTCACTACGACTGGGAAGCTC 105473 |||| || || || | |||| || | ||| |||| | ||||||| | | Sbjct 47089 TTGCTCCAGTTCGACCTTTGGGGAGTTACCCCCACCGGCTTG--TGGGACTGGGCCTCGC 47032 Query 105474 TCAAGGAACGCATCA-AGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCA 105532 ||||||| ||| | || | |||||||| || || || ||||| ||||| Sbjct 47031 TCAAGGAGAAGATCGCACGA-ACTGGTCTTCGCAATTCCCTGCTGTGTGCTCCTATGCCC 46973 Query 105533 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585 || ||||| ||| || ||||||||| ||||| ||||| ||||||||||| Sbjct 46972 ACTGCCTCGACCAGTCAGATCTTGGGTTTCAATGAGTGCTTCGAACCCTACAC 46920 Score = 89.7 bits (98), Expect = 6e-13 Identities = 171/252 (68%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| || || | || |||||||| || |||||||| |||||| ||||| Sbjct 48426 ATGATCATGCGTGTCGCAGTTGGCATTCATGGCGATGACATTGAACGTGTCTTAGAGACG 48367 Query 104291 TACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 || | |||||| | | |||| ||||| | || || ||||||||||||||| Sbjct 48366 TATAATCTGATGTCTGAGCGCTACTTCACACACGCTTCGCCTACTCTCTTCAATGCTGGT 48307 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 ||||| || ||| | | || |||||| | || ||||| || ||||| | Sbjct 48306 ACACCTCATCCACAACTCAGCTCGTGTTTCCTTGTTTGCATGAAGGATGATTCAATTGAT 48247 Query 104411 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 104470 ||||| |||| || || | | | |||||| ||| ||| ||||| || ||||| Sbjct 48246 GGTATTTATGATACCCTCAAGCAATGTGCGATGATCAGCAAGACTGCTGGAGGCATTGGC 48187 Query 104471 ATGCACATCCAT 104482 | |||||||| Sbjct 48186 CTCAACATCCAT 48175 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 104734 CATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGG 104793 ||||||| | ||||||| | |||| | ||| | || || || || || | || || || Sbjct 47816 CATGAAGCGCGTTGAGGCGGGTGGTGACTGGCCACTTTTCTGCCCCAACGAAGCCCCAGG 47757 Query 104794 TCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGG 104853 || | |||| || || |||||||| ||||| | ||| ||||||||| | ||| Sbjct 47756 ACTTGCTGATGTTCATGGCGAAGAGTTTGAGGCCCTGTTCACGAAGTACGAGAACGAAAA 47697 Query 104854 TCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAAC 104913 || || | ||| || || ||| | | ||| | || |||||| || | |||| Sbjct 47696 ACGTGCTAAGAAGACTGTTCCTGCTCAGAAACTTTGGTATGCGATTCTCGAGGCCCAAAT 47637 Query 104914 CGAGACTGGTACACCATACATGCTTTACAAAGACGCC 104950 ||||||||| ||||| ||||||||||| || ||| Sbjct 47636 CGAGACTGGAGGACCATTTATGCTTTACAAGGATGCC 47600 >seq444 Length=201600 Score = 113 bits (124), Expect = 5e-20 Identities = 279/414 (67%), Gaps = 17/414 (4%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || |||||||| || || || | ||| || ||| |||| ||| ||||||||| | Sbjct 10777 CGGTCAAAGCGCCCAGGTCGCATGAGAGCAGGATCGAGGACATCCGGCCGATTCGTCCCT 10718 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 || | || || ||| | || || ||||||||||||||||| || || || ||| Sbjct 10717 GCCAACACCACGATATGTTCTTTGGTACCAAAACCATCCATCTCTACCAGCAGCTGATTA 10658 Query 9644 ATAGTTTGTTCCCGTTCATCATTCGCTGGCA---TACCACCAGCACTGCGTTGCTTTCCC 9700 | || ||| |||||||||||| | | | || || ||| |||||| Sbjct 10657 AGTGTGGATTCGCGTTCATCATTCCCACCGAAGTTGCCTCCCTTTGAGCGGGACTTTCCA 10598 Query 9701 ACGGCATCAATCTCATCAATGAAGACGATGCATGGT---TGATTTT-CGCGAGCGACTTC 9756 | || || || ||||||| ||| | |||||| || || |||| ||| || | | Sbjct 10597 ATAGCGTCGATTTCATCAACGAAAATGATGCAAGGAGCGTGCTTTTTCGCT---GA-TGC 10542 Query 9757 AAAGAGATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCG 9814 ||| || ||||| ||| |||| | || |||||||| ||||| || || || | | Sbjct 10541 AAAAAGGTCCCG--CACCCTTGAAGAACCAACACCAACGAACATTTCGACGAACTCGGAT 10484 Query 9815 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9873 | || ||| | ||| || ||| | ||| |||||| | ||| |||| |||||| Sbjct 10483 CCAGAGACAGAC-AGGAAAGGAACAGAGGCTTCGCCCGCAGTTGCTTTCGCGATAAGAGT 10425 Query 9874 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||||| ||||| || |||| ||||| |||||||| || ||||||||||| Sbjct 10424 CTTACCAGTACCCGGGGGCCCCGAGAGGATAGCACCTCGCGGTATCTTGGCGCC 10371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583243776075400