Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq120 131 2e-25 >seq120 Length=370717 Score = 131 bits (144), Expect = 2e-25 Identities = 351/530 (66%), Gaps = 14/530 (3%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || ||||| | ||| || | || || || || | | ||| ||||| || ||||| ||| Sbjct 287572 CCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCGGGCATGAGACCACGTTTC 287631 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || | ||| ||||| | ||||| || ||||||||||||||| ||| |||||| Sbjct 287632 TTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATGCCTTCCACAGCCGCAAAT 287691 Query 74889 GCGACAAGGCGTTGCGCGAACG----GTGCATCGGAAGTCATCCAAGTCTGAGCCCATTC 74944 || || | |||| ||||| | || | | | || ||||| || |||||||||| Sbjct 287692 GCAACTAACCGTTCGGCGAAAGTAGAGTTC-TTGTCAGAGATCCACTTCAGAGCCCATTC 287750 Query 74945 AGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGG--CTTGCCTTCTC 75001 ||| || ||||| | ||||| | || ||||| || | |||||| || || ||| Sbjct 287751 AGCCTTCCGTTT-AATACAGGGAATGGTTTCGATGGCATCAAAGAGGTACTCGC--GCTC 287807 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | | ||||||| | |||| || | || || || || || |||||||| || Sbjct 287808 AGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGTTTCGGAATGAATGTTTTC 287867 Query 75062 GTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA 75121 | | ||| | | |||||| | || || || || ||| || || || || || Sbjct 287868 CATCATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTGCCTGGACTTCATTGGAGAA 287927 Query 75122 ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCAT 75181 | | | | || || |||| ||||| || || || || |||||||||| || Sbjct 287928 GCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGCAGCAAAAAAAGCCAAAACGTG 287987 Query 75182 TTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCCGC 75238 ||||||||||||||||| |||| ||| ||| | |||||| | |||||| | Sbjct 287988 CGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTCCAATCGTAAAGGTCCTTGGA 288047 Query 75239 CAAATCAATCTCCTCGACCGTCCAGAAACTCCCAATCGCCTTTTTGTACA 75288 | ||| |||||||| |||||||||| | ||||||||||||| Sbjct 288048 AAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACA 288097 Score = 118 bits (130), Expect = 1e-21 Identities = 204/292 (70%), Gaps = 7/292 (2%) Strand=Plus/Minus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 |||||| || | || || | |||||| || || | || |||||||| | |||||||| Sbjct 289751 GCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAGACCAGGCATCAAACCACGCTT 289692 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | |||||| || ||| ||||| ||| ||| || || ||||| ||| ||||| Sbjct 289691 CTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAAAAATATTCCTTCTACAGCGGCAAA 289632 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATT 74943 || ||||| |||| ||| || |||| | | ||| ||||| | ||||||| | Sbjct 289631 AGCAACAAGTCGTTCCGC-AAAGGTGGACTGTTGGTCTGATATCCATCTAAGAGCCCAGT 289573 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAG-GCTTGCCTTCTCT 75002 ||||||| || ||||| | || || ||||| || | ||| || || || | ||| Sbjct 289572 CAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGTCGAATAGATGTTTCCGT-TCT 289514 Query 75003 TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAA 75054 || |||||||||| | |||| || | || ||||| || ||||| |||| Sbjct 289513 TCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAGTTTCCGAGTGAA 289462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547200028133000