Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq641 170 2e-37 seq666 147 2e-30 seq654 114 1e-20 seq325 102 9e-17 seq458 98.7 1e-15 >seq641 Length=242067 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || ||||||||||| || |||||||| |||||| Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCATCA 73920 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||||||||||| ||||| || ||||| || ||||| || || Sbjct 73921 GATACCATCGACAACGTCAAGGCTAAAATCCAGGATAAAGAGGGTATCCCTCCTGATCAA 73980 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || || || || ||||||||||||| || || || | ||||| || Sbjct 73981 CAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAAC 74040 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||| |||||||| ||| | || || || || || Sbjct 74041 ATCCAGAAAGAATCCACCCTTCATCTCGTCCTTCGCCTCCGTGGAGG 74087 Score = 159 bits (176), Expect = 4e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| | || ||||||||||| || ||||| ||||| || | Sbjct 74089 ATGCAGATCTTTGTCAAGACTTTGACGGGCAAGACTATAACCCTTGAAGTTGAATCTTCT 74148 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || ||||| ||||||||||| |||||||| || || Sbjct 74149 GACACGATCGATAACGTTAAGGCGAAGATTCAAGACAAGGAGGGTATTCCTCCTGATCAA 74208 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || || ||||| |||||||| ||||||| || ||||| | || |||||| Sbjct 74209 CAACGTCTTATCTTCGCTGGCAAGCAACTTGAGGATGGGCGAACCCTCTCCGATTATAAT 74268 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || |||||||| || || ||||| Sbjct 74269 ATACAGAAGGAATCGACACTGCATCT 74294 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || || ||||| |||||||| || || ||||| Sbjct 73308 ATGCAAATCTTTGTCAAGACCCTCACTGGGAAGACAATTACTCTCGAAGTCGAGTCTTCG 73367 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||||| ||| | |||||||| || || ||||||||||| Sbjct 73368 GACACCATTGACAATGTCAAGGCTAAGATCCAAGACAAGGAGGG 73411 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 |||||||||| ||||| || || || || |||||||| ||||| ||||| |||| | | Sbjct 73463 GAATTCCTCCCGACCAACAACGCCTTATCTTTGCTGGGAAGCAGCTCGAAGATGGGAGGA 73522 Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCG 27628 | || | || || || |||| || || || |||||||||||||| | || || || | Sbjct 73523 CGCTCTCTGATTACAACATCCAGAAAGAGTCTACTCTTCATCTAGTTCTCCGCCTGCGTG 73582 Query 27629 GTGG 27632 |||| Sbjct 73583 GTGG 73586 >seq666 Length=522490 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| || || || ||||| || |||||||||||||| || Sbjct 282747 ATGCAAATTTTTGTCAAGACTCTGACAGGAAAGACCATCACTCTTGAGGTTGAATCGTCC 282688 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||||| || |||||||||||||| || || ||||| || ||| Sbjct 282687 GACACTATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATACCTCCCGATCAG 282628 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || || || |||||||| || |||| ||| || || | ||||| ||| Sbjct 282627 CAACGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGTCGCACTCTCTCGGACTACAAT 282568 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || ||||||||||| || || || Sbjct 282567 ATTCAGAAGGAATCCACCCTCCACCT 282542 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||||||| | || || ||||| ||||| || |||||||| || Sbjct 282467 ATGCAAATTTTCGTCAAGACGTTGACGGGGAAGACCATTACGCTCGAGGTTGAATCGTCG 282408 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||||| ||||||||||||||||| || || || || |||||| Sbjct 282407 GACACAATTGATAACGTCAAGGCGAAAATTCAGGACAAGGAAGGCATCCCCCCCGACCAG 282348 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || ||||| || || || || ||||| | || || || | || || || Sbjct 282347 CAACGCTTGATCTTTGCCGGGAAACAGCTTGAGGACGGCCGCACTCTTTCTGATTACAAC 282288 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || || || || ||||| || ||||||| |||||||| Sbjct 282287 ATTCAGAAAGAGTCGACGCTCCATCTTGTTCTGCGTCTCCGCGGTGG 282241 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| |||||||| ||||| ||||| ||||| | || || ||||| Sbjct 282239 ATGCAGATTTTTGTGAAGACGCTCACCGGAAAGACGATTACGTTGGAAGTGGAGTCGTCG 282180 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || |||| || || |||||||||||||| || ||||| || |||||| Sbjct 282179 GACACGATTGACAACGTGAAAGCGAAGATTCAGGACAAGGAAGGTATTCCGCCTGACCAG 282120 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || ||||| ||||| || ||||||||||| || | | || || | |||||||| Sbjct 282119 CAACGCCTAATCTTTGCGGGCAAGCAACTCGAAGACGGGAGGACGCTTTCCGACTATAAC 282060 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || ||||| ||| || ||||| Sbjct 282059 ATACAGAAGGAGAGCACCCTGCATCT 282034 Score = 113 bits (124), Expect = 5e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 |||||||||| |||||||| ||||| || ||||||||||| |||||||| |||| || | Sbjct 283150 GAATTCCTCCCGACCAGCAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGCCGCA 283091 Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCG 27628 | || | |||||||| | || ||||||||||| | ||||| || | |||||||| | Sbjct 283090 CGCTTTCCGACTATAACATTCAGAAGGAATCCACGTTGCATCTTGTGCTCCGTCTTCGTG 283031 Query 27629 GTGGA 27633 ||||| Sbjct 283030 GTGGA 283026 >seq654 Length=437428 Score = 114 bits (126), Expect = 1e-20 Identities = 319/482 (66%), Gaps = 18/482 (4%) Strand=Plus/Plus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||| | |||| ||| | | || | |||||| ||| ||| | | ||||| ||| Sbjct 47067 CCCCAAAGGTCGAACTGGAGCAATCCTTGCGACGCAGGACTACCCTGGTAGGTCTCATAC 47126 Query 80599 GGGCCCTCCGTCTTGGCCAGCTC---ACACGACTCCATAAGGGCCGCGTGATAAATGCAC 80655 || || || ||| |||| ||| || | ||||| | |||||||| || ||| | Sbjct 47127 GGTCCTTCTTTCTCCGCCATCTCGGTACTAGCCTCCAAA---GCCGCGTGGTAGATGGTC 47183 Query 80656 TCAAAGACGCCCTTGTTCA-CACC---GCGCGCCTGTGGGTCGTCGAACGACAAGCCCAT 80711 || |||| |||| | | || ||| ||| | | |||| || | || | || Sbjct 47184 TCGAAGATCTGAATGTTGAGCTCCTTGGCG-GCCGGAGAGTCG---AAGGGCATGTGCAA 47239 Query 80712 CATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT 80771 |||||||| | ||||| || || || || |||| | || || ||||| ||| |||| Sbjct 47240 AATCATGAAAGCATCAGCGAGACCTTGCACACCGACACCAATAGGACGGTGACGCATGTT 47299 Query 80772 CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCG 80831 ||| || ||| || || | |||||| | || ||| |||| || |||| ||| Sbjct 47300 CGAGCGACGGGCTTCGGGGACAGGGTAATAATTGACATCAATGATACGATTCAAATTGTA 47359 Query 80832 TGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCC--CTTCACA 80889 | |||||| |||||||| || |||||||| || || || | || ||| | | Sbjct 47360 AGCGACAACCTTGGTAACATCGTGGAGTTTCTGGAAATC--ATAGACACCATTCTTGATA 47417 Query 80890 AATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAAC 80949 || | |||||| || || |||| |||||| ||||| || || | | || Sbjct 47418 AACGAAGGAAGGGCGAGAGAAGCCAAATTGCAGACGGCAGTTTCATCTGGTGACGAGTAC 47477 Query 80950 TCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGAC 81009 || | |||||||||||||| ||||||||||| || || || ||||| || ||||| || Sbjct 47478 TCAATGATTTCCGTGCACAGGTTAGAAGACTTGATGGTCCCAAGGTTCTTTTGGTTGGAT 47537 Query 81010 TT 81011 || Sbjct 47538 TT 47539 >seq325 Length=398412 Score = 102 bits (112), Expect = 9e-17 Identities = 164/233 (70%), Gaps = 16/233 (7%) Strand=Plus/Plus Query 30328 GGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGGG 30387 |||||||| ||| ||| ||| ||| || ||||| | ||||| ||||| |||||||| Sbjct 295125 GGAATTCCTATTGAGATACATTCTAAGGAGAAAATATACATCCCAGAACTAATTTTTGGT 295184 Query 30388 CACCTTTTGACAAGCTCCAACTACAACGAC---GAGGAGCAGCGCGTGACGGGTGGACGA 30444 ||||| | || | ||||||||| ||||| ||| || ||| ||| ||||||||| Sbjct 295185 CACCTCCTAGCAGGGTCCAACTACGACGACAATGAGAAGAAGCTCGTT---GGTGGACGA 295241 Query 30445 AATGGCTACGGTGCAAAGCTCGCCAACGTTTTCAGTTCCCT--ATTCAAAATCAAAATTA 30502 || || || ||||| || || |||||| | ||| | || | ||||| ||| ||| | Sbjct 295242 AACGGTTATGGTGCCAAACTGGCCAACATCTTC--TCCCATGAATTCACGATCGAAACTG 295299 Query 30503 GTGACGGGA------AGAAGATATATGAGCAGACTTGGACAGATAACATGAGC 30549 ||| | || ||| ||| ||||||| ||||| |||| |||||| Sbjct 295300 CAGACAAAAATACTCAGCAGAAATACAAGCAGACGTGGACCAATAATATGAGC 295352 >seq458 Length=497640 Score = 98.7 bits (108), Expect = 1e-15 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || ||||| ||||||||||| || || || ||||| ||||| || ||||||| ||| ||| Sbjct 148106 ATCCCTCCCGACCAGCAGCGCCTGATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACC 148047 Query 27571 C-TAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 | |||| || || || |||||||||| || |||||||| | ||| | ||||| || || Sbjct 148046 CTTAGC-GATTACAACATCCAAAAGGAGTCTACTCTTCACTTGGTCCTTCGTCTCCGTGG 147988 Query 27630 TGG 27632 ||| Sbjct 147987 TGG 147985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570293754065200