Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq641 147 5e-30 seq666 134 3e-26 seq458 84.2 5e-11 >seq641 Length=242067 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || || || || ||||| || || | ||| ||||||| | |||| |||||| || || Sbjct 74294 AGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGT 74235 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| |||||||||||||| |||||||| || || |||||||| ||||||||||| ||| Sbjct 74234 TGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATC 74175 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||| || ||||| ||||| || | ||| || || | || || ||||||||| Sbjct 74174 TTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCC 74115 Query 225688 GTCAAAGTTTT 225698 |||||||| || Sbjct 74114 GTCAAAGTCTT 74104 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || ||||||||||| |||| ||||| |||| | ||| | ||||| Sbjct 74072 AGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCC 74013 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || |||||||| || |||||||| || || || ||||| || || || Sbjct 74012 TCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCC 73953 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| || |||||||| ||||| | || || || | ||||| ||| Sbjct 73952 TGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTC 73893 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | ||||| Sbjct 73892 TTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Score = 107 bits (118), Expect = 5e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || ||||| || ||||| |||| |||||||| | | || ||||||||| Sbjct 73571 AGAACTAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAGAGCGTCCTCCCATCT 73512 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||||||||| |||||||| |||||||||||||| ||||| Sbjct 73511 TCGAGCTGCTTCCCAGCAAAGATAAGGCGTTGTTGGTCGGGAGGAAT 73465 >seq666 Length=522490 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || || || || ||||| || || | ||||||||| | | || | |||||||| ||| Sbjct 282820 AGATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGC 282879 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 || || || |||||||| | ||||| ||||| || |||||||||||||| ||||||||| Sbjct 282880 TGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATC 282939 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || || ||| |||||||| || |||| ||||| || | ||||| ||||| || Sbjct 282940 TTGGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCA 282999 Query 225688 GTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || |||| || | |||||| Sbjct 283000 GTCAAGGTCTTTACAAAAATCTGCATT 283026 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||||||||| |||||||| || || | |||||| || | | ||| | |||||||| | Sbjct 282540 CAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAA 282599 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 | ||||| || |||||||| | ||||| || ||||| || |||||||||||||| || | Sbjct 282600 GTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAA 282659 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| || || || ||||| || | ||| || || | ||||| ||||| | Sbjct 282660 TCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTC 282719 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | |||| ||| || | || | |||||| Sbjct 282720 CTGTCAGAGTCTTGACAAAAATTTGCAT 282747 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| ||||| ||||| || || ||||| || | |||||||| | | ||| Sbjct 282247 CGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTG 282306 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || ||||| ||||| || ||||| | ||||| |||||||| || || ||| Sbjct 282307 CGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGGATGCCT 282366 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || || || ||| || || || ||||| || | ||| || || | | Sbjct 282367 TCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACCTCGAGC 282426 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| |||||||| || || | ||| | |||||| Sbjct 282427 GTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 225550 GTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATA 225609 || ||||| ||||| || ||||| || || ||||| || ||||| ||||| ||||||||| Sbjct 282076 GTCCTCCCGTCTTCGAGTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATA 282135 Query 225610 CCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCT 225669 ||||||||||| || ||||| ||||| || || ||||| || | ||||| || Sbjct 282136 CCTTCCTTGTCCTGAATCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCC 282195 Query 225670 AACGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || || Sbjct 282196 AACGTAATCGTCTTTCCGGT 282215 >seq458 Length=497640 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| ||||| || || ||||||| ||||||||| | || | ||||| Sbjct 148000 AGGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGCTAAGGGTGCGACCATCC 148059 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || |||||||| ||||||||||| || || || |||||||| || |||| Sbjct 148060 TCAAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATAC 148108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192495522820490