Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq120 154 1e-32 >seq120 Length=370717 Score = 154 bits (170), Expect = 1e-32 Identities = 359/537 (67%), Gaps = 11/537 (2%) Strand=Plus/Plus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| ||| || || | ||| || || ||||| || || || || |||||||| | ||| Sbjct 287566 TGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCGGGCATGAGACCA 287625 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | || || ||||| || || | ||||| || || || ||||| |||||||| || || Sbjct 287626 CGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATGCCTTCCACAGCC 287685 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCC 4742 ||||| || ||||| || |||| | | ||||| ||||| || | ||| Sbjct 287686 GCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCAGAGATCCACTTCAGAGCC 287745 Query 4743 CAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTT 4802 || | ||| || |||| || ||||| || | || || | ||| | | ||| Sbjct 287746 CATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATCAAAGAGGT-ACTCGCG 287804 Query 4803 -TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATT 4861 ||| | |||| | || ||||||||||| || || ||| |||| ||||| || || Sbjct 287805 CTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGTTTCGGAATGAATGTT 287864 Query 4862 TTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACA 4921 ||| || |||||||| || || || || | |||||| | | | || ||||| || | Sbjct 287865 TTCCATCATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTGCCTGGACTTCATTGGA 287924 Query 4922 AAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAAC 4981 || | || || | ||||||||| || || || || || |||||||| |||||||| Sbjct 287925 GAAGCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGCAGCAAAAAAAGCCAAAAC 287984 Query 4982 ATGAGATATAAAGT---ACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGGGGCAAATC 5035 || || ||||||| || | |||| || | ||| ||||| | | | || Sbjct 287985 GTGCGAGATAAAGTGGCGCTCATTGTCA---TTGAGGCGTTCATTCCAATCGTAAAGGTC 288041 Query 5036 TTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || | | ||| | || ||| | ||||| || || ||||| || ||||||||||| Sbjct 288042 CTTGGAAAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACAT 288098 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/176 (74%), Gaps = 12/176 (7%) Strand=Plus/Minus Query 4263 TATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATA 4322 || ||||| || |||||||| ||||| || || || |||| | ||||| | |||||| Sbjct 290112 TAATCGGAAACCCGCTTTTCAAAGAAGTTGGTCTTTCCTTGCATAGAAATCATATCCATA 290053 Query 4323 AAATCAAACGGATTAGTTGCG--TTGTAATGTTTTTCACACTTT---AGAGCTACAAGCA 4377 ||||| || || || ||||| ||||| ||| || ||| ||||| ||||| | Sbjct 290052 AAATCGAAGGGGTT--TTGCGAACCGTAATATTTATC---GTTTCCCAGAGCGACAAGAA 289998 Query 4378 ATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT-TCGCAGTTAATTCCAAT 4432 ||| || || |||||||| |||||||||| ||||||| | ||| || || ||||| Sbjct 289997 GTCGATCTGCGACAAATTCAATATACTGGCACATGAGTATAGCA-TTCATGCCAAT 289943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427037447102555