Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq641 122 2e-22 seq666 107 4e-18 >seq641 Length=242067 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| |||||||| || || ||||| ||||||||||| |||| | ||| | ||||| Sbjct 74072 AGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCC 74013 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || |||||||| || | || || || | | ||| || || || || Sbjct 74012 TCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCC 73953 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||| | || | | | ||||| ||| || ||||| || ||||| Sbjct 73952 TGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTC 73893 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || |||||||| ||||||| |||||| Sbjct 73892 TTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 ||||| || || || || || || || || ||||||| | |||| |||||| || || Sbjct 74294 AGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGT 74235 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 || || ||||||||||| | || || || | | || || ||||| |||||||| Sbjct 74234 TGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATC 74175 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || || | || | |||| ||| || |||||||| || ||||| |||||| Sbjct 74174 TTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCC 74115 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || | |||||| || |||| |||||| Sbjct 74114 GTCAAAGTCTTGACAAAGATCTGCAT 74089 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || |||||||||||||||||||| |||||||||||||| | | || |||||||| Sbjct 73572 GAGAACTAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAGAGCGTCCTCCCATC 73513 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC 151990 ||| || ||||| || |||||||| | || ||||| Sbjct 73512 TTCGAGCTGCTTCCCAGCAAAGATAAGGCGTTGTTGGTC 73474 >seq666 Length=522490 Score = 107 bits (118), Expect = 4e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| || || |||||||| || ||||||||||| | | ||| | || || Sbjct 282256 AGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCC 282315 Query 151953 TCTAGGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||||||||| ||||| |||| | |||||||| | | ||| |||||||| || Sbjct 282316 TCAAGCTGTTTCCCGGCAAAGATCAAGCGT-TGCTGGTCGGGGGGGATGCCTTCCTTGTC 282374 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||||| ||||| | || | |||| || || || || || ||||| || Sbjct 282375 CTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACCTCGAGCGTAATGGT 282434 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| | ||||| ||||| | ||||| Sbjct 282435 CTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 |||||||| ||||| || || || || |||||||| | | || | |||||||| || Sbjct 282820 AGATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGC 282879 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 ||| ||||||||||| | | |||||||| | | || |||||||| ||||| || Sbjct 282880 TGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATC 282939 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || ||||||| | || | | | || || ||| || ||||| || || || || || Sbjct 282940 TTGGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCA 282999 Query 152079 GTGAGAGTCTTCACGAAGACCTGCATT 152105 || | ||||| || || | ||||||| Sbjct 283000 GTCAAGGTCTTTACAAAAATCTGCATT 283026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153786280926785