Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq666 163 3e-35 seq641 107 2e-18 >seq666 Length=522490 Score = 163 bits (180), Expect = 3e-35 Identities = 163/209 (78%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 41655 CCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGA 41714 |||||||||| |||||||||||||| |||||||||||||| || || | | |||| |||| Sbjct 282032 CCAGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGA 282091 Query 41715 GCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGA 41774 | |||||||| || || || ||||| || ||||| | |||| | ||||||||| ||| Sbjct 282092 GTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCC-TGA 282150 Query 41775 TTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 | || |||| ||| | | | ||||| ||||||||| |||| ||| ||||| || Sbjct 282151 ATCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTT 282210 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||||||| || ||||||||||| Sbjct 282211 CCGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| ||||| ||| ||||||||||| || || || Sbjct 282241 CCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAA 282300 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||| || ||||| || |||| ||| || ||||| | ||| Sbjct 282301 AGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGG 282360 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| |||| || | ||| | | ||||| ||| || || Sbjct 282361 ATGCCTTCCTTGTCC-TGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAAC 282419 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| || || || ||||||| |||||| |||||||| ||||| Sbjct 282420 CTCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 107 bits (118), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 41647 ACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTC 41706 ||||| || || || || ||| ||||||||||| || ||||| ||||| ||||| | Sbjct 282534 ACGTACCA--AGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACC 282591 Query 41707 GTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTT 41766 || || || |||||||||||||| |||| ||| || || || | || | | ||||| Sbjct 282592 ATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTT 282651 Query 41767 GTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTA 41825 |||| ||| | || || | ||| | | ||||||| ||| || ||||| | || | Sbjct 282652 GTCC-TGAATCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGA 282710 Query 41826 TCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || ||||| ||||| || ||||| ||||| Sbjct 282711 TGGTCTTTCCTGTCAGAGTCTTGACAAAAATTTGCAT 282747 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||||||||| || || || || || || || | || |||||||| || |||||||| Sbjct 282835 TCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCGGCGAAG 282894 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| || || ||||| | ||||| | ||||| | | || | || | || || Sbjct 282895 ATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTAT-CTTGGATCTTGGTTTTGACATT 282953 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | || ||| ||||||||||| | || || || || || |||| |||||||| Sbjct 282954 GTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTCTTTAC 283013 Query 41851 GAAAATCTGCAT 41862 ||||||||||| Sbjct 283014 AAAAATCTGCAT 283025 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||||| |||| ||||||||||||||||||||||| Sbjct 283027 CCACCACGAAGACGGAGCACAAGATGCAACGTGGATTCCTTCTGAATGTTATAGTCGGAA 283086 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||| || || || || || || || || || ||||| | ||| Sbjct 283087 AGCGTGCGGCCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGCTGGTCGGGAGGA 283146 Query 41756 A 41756 | Sbjct 283147 A 283147 >seq641 Length=242067 Score = 107 bits (118), Expect = 2e-18 Identities = 154/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| |||||||| || |||||||| || ||||| ||||||||||| ||| | || | Sbjct 74299 CACCGAGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCT 74240 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | || |||||||| ||||| || || || ||||| || | |||| | |||||||| | Sbjct 74239 CAAGTTGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGT-CT 74181 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| | || || | |||| | | ||||| || || || || | ||||| || Sbjct 74180 TGAATCTTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTC 74121 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||||| ||||| || || ||||||||| Sbjct 74120 TTGCCCGTCAAAGTCTTGACAAAGATCTGCATG 74088 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || ||||| || ||| || ||||| ||||| |||||||| Sbjct 74088 GCCTCCACGGAGGCGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 74029 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| | || ||||| || ||||| ||||| || || || ||||| || | || Sbjct 74028 GAGAGTGCGTCCATCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGG 73969 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||| || ||| || |||| || | ||| | | | || || ||||| | Sbjct 73968 GATACCCTCTTTATCC-TGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGA 73910 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || ||||| ||||| ||||| |||||||| Sbjct 73909 CCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462290506502000