Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 4e-14 >seq2 Length=1435055 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || ||||||||||| || || ||| |||| ||| || | Sbjct 394821 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCT 394762 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||| ||| ||||| || ||| | || |||||| Sbjct 394761 GACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAA 394702 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || |||||||| ||||| || || || ||| | ||| || | |||||||| Sbjct 394701 CAACGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGAACATTGTCAGATTACAAC 394642 Query 29142 ATTCAGAAGGAATCTACTCTTCA-CATGGTG 29171 || ||||| || || ||||| || | ||||| Sbjct 394641 ATACAGAAAGAGTCGACTCTGCATCTTGGTG 394611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 || |||||| | |||||||| || ||||||||||| || ||| | ||| | |||| Sbjct 394935 GACCAACAACGTCTTATCTTCGCTGGCAAACAACTCGAGGATGGCCGCACTCTCTCCGAC 394876 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||||||||||||||| |||||| | || | || | ||||||| Sbjct 394875 TACAATATTCAGAAGGAATCTACACTTCACCTTGTCCTTCGGCTCAGAGGAGG 394823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428326853955560