Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq54 93.3 5e-14 >seq54 Length=345059 Score = 93.3 bits (102), Expect = 5e-14 Identities = 164/238 (69%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 145990 TCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCC 146049 ||||||||||| || ||||||| ||| ||| ||| ||| | | ||| || |||| Sbjct 181142 TCCCTGAGCTGATCAACGCCCTCGCCCGTGTAGTCTTTCTCACAATTCACATATTCGGCT 181201 Query 146050 CCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTG---TGC 146106 || ||||||| |||||| || ||||| || || ||||| || || ||| | | ||| Sbjct 181202 CCAAAGTGCCGCCACTGAAATCCGTAAACAGGGCCCAGATCACC---CTCGCRGCGATGC 181258 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 | || || | | || || || || || ||||| | |||||||||||||||||| Sbjct 181259 CGTAGGCCTCTGCTATCTAGAAACTCGCGTGAACCGTTCCCATCCCAGATCTTGACGCCC 181318 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGA 146224 | || || | || || ||| | || ||||||||| |||||||| |||| Sbjct 181319 TTTTTAGAAAGGAGCGTCGAATCAGTGCAGCCGTGGATGAACCAAAGCAGCTCCTCGA 181376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590063877318080