Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=1986796 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| ||||| || ||||| | || || | |||| || || || ||||| Sbjct 634831 GTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGTTGCTTGCCG 634890 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | | ||| ||||| ||| | ||||||||||| |||||| ||| Sbjct 634891 GCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTG 634950 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | |||||| | |||| |||| ||||||||||||||| || || || Sbjct 634951 ACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCCAGTCAAAGTC 635010 Query 21159 TTGACAAATATTTGCATT 21176 || ||||| ||||||||| Sbjct 635011 TTTACAAAGATTTGCATT 635028 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 20968 CCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCA 21027 ||| |||||| ||| |||||| || ||||| ||||| | || || |||| || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 21028 GCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGA 21087 |||| ||||||||| | || || | ||||||||| || | ||||||||||| | Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAA 634139 Query 21088 TCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGC 21147 ||||| ||||| | | | | || || | |||| ||||| ||||| ||||||| Sbjct 634140 TCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGC 634199 Query 21148 CGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| | ||| || || || || ||||| Sbjct 634200 CGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422250183710432