Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq2 87.8 1e-12 >seq1 Length=1986796 Score = 104 bits (114), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 34182 CCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCA 34241 |||| || || || || || ||||| ||||||||||| || ||| | |||| || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 34242 ACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCT 34300 ||||||||| || || || || ||||||||||| | ||| | || |||||||| Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCT-TCCTTGTCCTGA 634138 Query 34301 ATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTG 34360 |||||| ||| | | | | |||| || | || || || |||| ||| || || ||| Sbjct 634139 ATCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTG 634198 Query 34361 CCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || ||||| || |||||||| Sbjct 634199 CCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 >seq2 Length=1435055 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 |||| || || ||||| | ||| ||| ||||| || ||||||||||| || ||| Sbjct 394832 AGCCGAAGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGG 394891 Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291 | || || | || ||||| ||||| || || || || ||||| || | || |||| Sbjct 394892 CCATCCTCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCC 394951 Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351 || || ||||| ||| | || | | || | ||| | || ||||| || | ||| Sbjct 394952 TTATCCTGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTG 395011 Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || ||||| || || || |||||||| Sbjct 395012 ATAGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 395049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323065101605120