Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq21 113 1e-19 >seq21 Length=1130388 Score = 113 bits (124), Expect = 1e-19 Identities = 191/277 (69%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 248826 CTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGA 248885 ||| | |||||| || |||||| || || |||||| || |||| ||| || Sbjct 174458 CTTCGGTTTCAAGACACTGGAGCGTTCATACCTCCTCCGGATAAATGGACGCGTCGCTGA 174517 Query 248886 ACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAG 248945 || ||| |||||| | ||||| || || || || ||||| |||||||| || | Sbjct 174518 GCGTCCTCAACACATGATCATGCGTGTTGCGGTTGGCATTCATGGTGATGACATTGATCG 174577 Query 248946 CGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCT 249005 ||| ||||||||||| | | ||| ||| |||| | ||||||||| | || || || Sbjct 174578 CGTCCTCGAGACGTATAACCTTATGTCTGAGCGCTACTTCACACATGCCTCGCCTACACT 174637 Query 249006 CTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGA 249065 |||||| |||||||| | || || || |||||||| || ||| | ||| | || Sbjct 174638 CTTCAATGCCGGTACACCCCACCCACAACTTAGCTCGTGTTTCCTTGTCTGTATGAAGGA 174697 Query 249066 CGACTCTGTCGACGGCATTTATGACACGCTTAAACAG 249102 ||| || |||| || || ||||| || || || ||| Sbjct 174698 CGATTCAATCGATGGTATCTATGATACCCTCAAGCAG 174734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073742296628736