Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=1435055 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || || || || ||||| ||||| ||| |||| |||||||| Sbjct 394821 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCT 394762 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTA--CCGGTTGACC 24949 |||| | || | ||| |||| ||| ||| | | | ||| ||| ||| || ||| | Sbjct 394761 GACACCATCGATAATGTCAAGGCAAAGATT-CAGGATAAGGAGG-GTATTCCTCCTGATC 394704 Query 24950 AGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACA 25009 | |||||| | || | ||| ||||| || || || ||| | || || ||||||| Sbjct 394703 AACAACGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGAACATTGTCAGATTACA 394644 Query 25010 GCATACAGAAAGAGGCCACGCTTCAT 25035 ||||||||||||| | || || ||| Sbjct 394643 ACATACAGAAAGAGTCGACTCTGCAT 394618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418295068163840