Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3 221 2e-52 >seq3 Length=1746238 Score = 221 bits (244), Expect = 2e-52 Identities = 396/570 (69%), Gaps = 14/570 (2%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || |||||| ||||| ||| || |||||||| | || || | ||| ||||| Sbjct 1249485 AACAACAGACATGCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAG 1249426 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 ||||| || || ||||||| || ||||| || | ||| || || | ||||| || ||| Sbjct 1249425 AACGTAAGACCAGGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACCCA 1249366 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328 || || || || |||||||| || || || |||| |||| || || || || |||| Sbjct 1249365 GAGAAAAAGATCCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTGG-ACTG 1249307 Query 36329 TC-ATG---TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 | || |||||| | |||||||||| || || || ||||| | || || || Sbjct 1249306 TTGATCCGATATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTC 1249247 Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AA 36442 || || | || |||| | ||| | ||| || | || ||||| || | || Sbjct 1249246 GATGGCGTCGAAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAA 1249187 Query 36443 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTA 36502 ||| || | ||||||| |||| ||||| || ||||| || |||||||| || | Sbjct 1249186 AGAGTA--CGTTTCCGAGTGAACATTTTCCATCATAATTTGGAAGCCGTAGAAGCAACGT 1249129 Query 36503 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCG 36562 ||||| | ||||||| ||| || |||| | || | ||| |||||||| || ||| Sbjct 1249128 GCCTCAGCTATCTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCG 1249069 Query 36563 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA-G 36621 || || |||||||| || | || || || |||||| |||||| || |||| | Sbjct 1249068 TCGGAAGCAGCAAAAAATGCGAGGACGTGGGAAATGAAATATCGTTCGTT-GGAGTTAAG 1249010 Query 36622 TTTAT---TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 36678 ||||| ||||||| ||| ||| | | | | ||| | |||||| ||||||||||||| Sbjct 1249009 TTTATAGTTCCAATCCATGAGATCATGACAGAGATCTATTTCTTCGGCTGTCCAAAATGA 1248950 Query 36679 TGCCTCTGCCTTTTTATACATATTCCAGAT 36708 ||||| ||||| |||||| | |||||| || Sbjct 1248949 TGCCTGTGCCTGTTTATAAAAATTCCATAT 1248920 Score = 183 bits (202), Expect = 4e-41 Identities = 376/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| ||||| ||| ||| | |||||| || | ||| || | || || || || || | Sbjct 1247214 ACAAGCGAAGTCGGTGTGCATACCCTCATCACGACTGATAAGCTCATTTGAGAAGGTTAA 1247273 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || ||||| || |||||||| || |||||||| || || ||||| || || |||||||| Sbjct 1247274 GCCAGGCATCAGACCACGCTTCTTGAGCCAAAAGATTGATGCAAAGGAGCCTGAAAAGAA 1247333 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATG 36333 || ||||| || || ||||| || | | || || | | | | ||||| Sbjct 1247334 GATGCCTTCCACAGCTGCAAATGCGACCAATCGTTCGGCGAATGTAGAGTTCTTGTCAGA 1247393 Query 36334 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 36393 ||||||||| | ||||| || ||||| || | ||| || || ||||| || |||| Sbjct 1247394 TATCCACTTGAGGGCCCATTCAGCCTTACGCTTGATACAGGGGATGGTCTCGATGGCATC 1247453 Query 36394 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 36453 ||| ||||| | |||| || || | || || || || | ||| ||| | Sbjct 1247454 AAAAAGATACTCGCGTTCAGCTTGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGTACGT 1247513 Query 36454 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 36513 ||| |||||||||||||| || |||||||| || ||||| || | ||| || | Sbjct 1247514 TTCGGAATGAATGTTTTCCATCATGATTTGAAAACCATAGAAGCAGCGAGCTTCAGCGGC 1247573 Query 36514 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 36573 ||| ||||| | |||| ||||| | | ||||| || || || || || || || Sbjct 1247574 CTGAACTTCGTTGGAAAAGCGTTCGACAAGGTTTTCGTTGACGATGCCATCGGAAGCAGC 1247633 Query 36574 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTA---GTTTATTCCA 36630 |||||| ||||| ||||| ||||| | || || | | ||| |||||| Sbjct 1247634 AAAAAAGGCCAAAACATGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTCCA 1247693 Query 36631 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 36690 ||| | || ||||| || | ||||| || || | ||||| || ||||| |||||||| Sbjct 1247694 ATCGTATATGTCTTTGGAAAGATCCATCTCCTCGGCCGTCCAGAAGGATGCTTCTGCCTT 1247753 Query 36691 TTTATACATATTCCAGAT 36708 ||| ||||| | ||| || Sbjct 1247754 TTTGTACATCTGCCATAT 1247771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658158386015680