Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 seq1 91.5 1e-13 >seq2 Length=1435055 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| ||||| || ||| | || || ||||| || || Sbjct 394625 GTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTGCTTGCCT 394684 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| ||||||||||||| ||||| ||||| || || || || || ||| | |||| || Sbjct 394685 GCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATC-CTGAATCTTTGCCTT 394743 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | ||||| | || || || || | ||| | ||||||||| ||||| || Sbjct 394744 GACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAAGT 394803 Query 139747 TTTTACGAATATTTGCATAGCT 139768 || ||||| || |||||| || Sbjct 394804 CTTGACGAAAATCTGCATACCT 394825 >seq1 Length=1986796 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| || || | || ||| |||||| ||||| || || ||| | Sbjct 634036 CTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAA 634095 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 |||||| || ||||| || || || || ||||| ||||| ||| | |||| || | Sbjct 634096 GATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCC-TGAATCTTTGCCTTCACGT 634154 Query 139693 TTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751 | || | ||||| | | |||||| || | || | |||||||||||||| ||| || | Sbjct 634155 TGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCA 634214 Query 139752 CGAATATTTGCATA 139765 |||| || |||||| Sbjct 634215 CGAAAATCTGCATA 634228 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| ||||| || || || | |||| ||||||||||| || || Sbjct 634538 GTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTCGAGCTGCTTCCCG 634597 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||||| || || ||||||||||| |||||||| ||||| |||||| || Sbjct 634598 GCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTG 634657 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | || |||| | ||| ||||| | || | ||||| |||||||| || Sbjct 634658 ACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTCCGGTCAAAGTC 634717 Query 139748 TTTACGAATATTTGCATA 139765 || || || ||||||||| Sbjct 634718 TTGACAAAGATTTGCATA 634735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496053136198400