Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 9e-15 >seq1 Length=1986796 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | |||||| || || | ||| || |||| || | ||| ||||||||||| Sbjct 634837 TCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCAAAG 634896 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||| |||||||| |||| || | ||||| || || |||| ||||||| || Sbjct 634897 ATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTG 634956 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || || ||| || || | || || || || || || | ||| || ||| Sbjct 634957 TCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCCAGTCAAAGTCTTTACA 635016 Query 43099 AAAATTTGCATT 43110 || ||||||||| Sbjct 635017 AAGATTTGCATT 635028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381361456805616