Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2 102 8e-17 seq1 96.9 4e-15 >seq2 Length=1435055 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || || ||||| |||||||||||||| || ||| | || || || || || || Sbjct 394625 GTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTGCTTGCCT 394684 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| ||||||||||||| ||||| ||||| || || || || || ||| ||| || Sbjct 394685 GCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATCTTTGCCTTG 394744 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | || ||| ||||| | || | ||||||||| ||||| || Sbjct 394745 ACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAAGTC 394804 Query 143168 TTTACGAATATTTGCATAGCT 143188 || ||||| || |||||| || Sbjct 394805 TTGACGAAAATCTGCATACCT 394825 >seq1 Length=1986796 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||||| ||| | ||| | || || ||||| || ||||||||||| | Sbjct 634229 CCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGAC 634288 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| |||||| || ||||| || ||| |||||| ||||| || || ||||| Sbjct 634289 AGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGA 634348 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || ||||| ||||| || | | || | |||||| | | ||| || Sbjct 634349 ATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACC 634408 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||| |||| || || || || ||||||||| Sbjct 634409 TCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCATA 634456 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053 || || || |||||||| || | || ||| |||||| || || || || ||| || Sbjct 634037 TCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAAG 634096 Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113 ||||| || ||||| || || || || ||||| ||||| ||| ||| || | | Sbjct 634097 ATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTG 634156 Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173 || | |||||||| | || ||||| | || | |||||||||||||| || || ||| Sbjct 634157 TCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCACG 634216 Query 143174 AATATTTGCATA 143185 || || |||||| Sbjct 634217 AAAATCTGCATA 634228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507003296384640