Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=1986796 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 |||||||||||| || || || || ||||| || || | | ||||||| | ||| Sbjct 634824 ATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGTTG 634883 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||||| || | |||||||| ||||||||| || || ||||| ||||| || || Sbjct 634884 CTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATCTT 634943 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | || ||| | || |||||||| | || || || | ||||||||| || || || Sbjct 634944 GGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCCAGT 635003 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || ||| |||||||| |||||||| Sbjct 635004 CAAAGTCTTTACAAAGATTTGCAT 635027 Score = 102 bits (112), Expect = 6e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | ||| || || || ||||| || ||||||||||| ||| | | ||||||| Sbjct 634246 AACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGACAGAGTGCGACCGTCTTC 634305 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | ||||| || || | ||||| ||||||||||| ||||| || || ||||| Sbjct 634306 AAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGAATGCCCTCCTTGTCCTG 634365 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| ||| | || || || ||| | ||| || || | || ||||| || Sbjct 634366 GATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACCTCGAGCGTGATGGTCTT 634425 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || || ||||||||||||||| Sbjct 634426 GCCCGTCAGCGTCTTGACAAAAATTTGCATA 634456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362171466568632