Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq12 136 6e-28 seq31 127 3e-25 seq431 109 9e-20 >seq12 Length=798502 Score = 136 bits (150), Expect = 6e-28 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||||| | ||| || || |||||||| || ||||| || || || || Sbjct 651263 GCTAAGCGTCATCGCAAAATTCTACGTGACAACATCCAGGGTATCACAAAACCTGCCATT 651322 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| |||||||||||||| || |||||| | ||||| | ||||||| |||| | Sbjct 651323 CGTCGTCTTGCTCGTCGTGGTGGTGTGAAGCGTATTTCTGGTCTCATCTATGAGGAGACT 651382 Query 16553 CGTGATGTTTTGAAGATCTTCCT 16575 |||| |||| ||||||| ||||| Sbjct 651383 CGTGGTGTTCTGAAGATTTTCCT 651405 >seq31 Length=457886 Score = 127 bits (140), Expect = 3e-25 Identities = 116/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| ||| |||||| |||||||| || || || || ||||| ||||| Sbjct 51941 GCCAAGCGCCATCGCAAGAT-TCTTCGTGATAACATTCAGGGTATTACGAAGCCTGCTAT 51883 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| ||||||||||| || || |||||| | ||||| | | ||||| |||| Sbjct 51882 TCGTCGTCTTGCTCGTCGTGGAGGTGTGAAGCGTATTTCTGGTCTCATTTATGAGGAGAC 51823 Query 16552 TCGTGATGTTTTGAAGATCTTCCT 16575 ||||| |||| ||||||| ||||| Sbjct 51822 TCGTGGTGTTCTGAAGATTTTCCT 51799 >seq431 Length=44838 Score = 109 bits (120), Expect = 9e-20 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| |||||||| ||||| ||||| ||||||||||| |||||| |||| Sbjct 41241 AGGTATCACGAAGCCTGCTATCCGCCGTCTCGCTCGGCGTGGTGGAGTAAAGCGTATCTC 41182 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 |||| | |||| ||||||| |||| || ||||||||||| | ||| || ||| Sbjct 41181 TGGACTCATCTACGAAGAGACCCGTGGAGTGTTGAAGATCTTTTTGGAGAATGTCATCAG 41122 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 || || | || || ||||| |||||||| Sbjct 41121 GGACTCTGTTACTTACACTGAGCATGCTAAACG 41089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073598134136