Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 seq1 87.8 2e-12 >seq2 Length=1435055 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | ||||| || | ||||| |||| | || ||| Sbjct 395049 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACTATCACTCTCGAGGTCGAGTCATCA 394990 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | ||||| |||||| || || || || || ||||| || ||| Sbjct 394989 GATACCATTGACAATGTCAAGGCGAAGATTCAGGATAAGGAGGGCATCCCTCCTGACCAA 394930 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || |||||||||||||| |||| | | || |||||| || Sbjct 394929 CAACGTCTTATCTTCGCTGGCAAACAACTCGAGGATGGCCGCACTCTCTCCGACTACAAT 394870 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || |||||||| | || || ||||| | || |||||||| Sbjct 394869 ATTCAGAAGGAATCTACACTTCACCTTGTCCTTCGGCTCAGAGGAGG 394823 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || || |||||||| ||||| | ||||| Sbjct 394821 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCT 394762 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||||| || || || || || ||||| |||||| Sbjct 394761 GACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAA 394702 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA--AACGTCAGCGACTATA 26946 ||| | || || | | ||||| || || || |||| || | |||| || || | Sbjct 394701 CAACGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGAACATTGTCA--GATTACA 394644 Query 26947 ACATTCAAAAAGAATCTACTATCCATCT 26974 |||| || ||||| || ||| | ||||| Sbjct 394643 ACATACAGAAAGAGTCGACTCTGCATCT 394616 >seq1 Length=1986796 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || ||||| | || || |||| | || || | Sbjct 634734 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTCGAGGTCGAGTCGTCC 634675 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | ||||| || || ||||| ||||| || |||||||||||| Sbjct 634674 GATACCATTGATAACGTCAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCCGATCAA 634615 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || ||| || || |||||||||| | | | | || ||||| || Sbjct 634614 CAGCGCTTGATCTTCGCCGGGAAGCAGCTCGAAGATGGTCGCACCCTCTCAGACTACAAT 634555 Query 26949 ATTCAAAAAGAATCTACTATCCATCT 26974 ||||| ||||| || || ||||||| Sbjct 634554 ATTCAGAAAGAGTCCACCCTCCATCT 634529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478651917293440