Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq21 120 8e-22 seq3 116 1e-20 >seq21 Length=1130388 Score = 120 bits (132), Expect = 8e-22 Identities = 220/323 (68%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATT 364254 || ||||| ||| || ||||||| || || || ||||| || || || ||||| Sbjct 175415 AAATCCAATCAGAAGAACCTTGGGACTATCAAGTCTTCTAACCTGTGCACGGAAATTATY 175474 Query 364255 GAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCG 364314 |||||| | | || || ||||||||||| || ||||| || || |||| || || || Sbjct 175475 GAATACTCGTCACCGGATGAGACTGCCGTCTGCAACCTGGCTTCTCTCGCTCTGCCCTCG 175534 Query 364315 TTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374 || | || ||||| || |||| |||| | || | || || || | || | || Sbjct 175535 TTCATTAAGAATGGTGTTTATGACTTCCAGAAACTCCACGATGTTACGAAGGTTGTTGCT 175594 Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434 | |||| | | |||||||| || || ||||| |||| |||||| | ||| Sbjct 175595 TTCAATTTGAATCGTATTATCGACGTCAACTACTATCCCGTTCCCGAAGCCCGTCTTTCC 175654 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494 || |||||||| || || |||||| | ||||| || ||||| ||||| | || ||||| Sbjct 175655 AACATGCGTCACCGTCCTATTGGTATCGGTGTGCAAGGCCTAGCTGATGCCTTCATGATT 175714 Query 364495 CTCAAGATGGCATTTGATTCGCC 364517 || | ||| | || || || || Sbjct 175715 CTTCACATGCCCTTCGACTCTCC 175737 Score = 105 bits (116), Expect = 2e-17 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || |||||||||||| | || ||||||||||| | | ||| ||||| | ||||| Sbjct 174872 GGCTACTCGAATGGGATTGTACCCATGCTTCGAGCATATGATGCCACTGCTCGCTACGTT 174931 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||| || || ||||| ||| || ||||| || || |||||||| || ||| Sbjct 174932 GACCAAGGAGGTAACAAGCGACCAGGTGCCTTTGCGATCTACATCGAGCCTTGGCACGCC 174991 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 || | || || || ||||| | | || ||| ||||| || ||| | ||||| || Sbjct 174992 GACGTCTTCGAATTCCTTGACTTGAGAAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGA 175051 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 ||||| || ||||| |||||||| |||||| Sbjct 175052 GATCTTTTTTATGCCCTTTGGGTGCCTGACC 175082 Score = 93.3 bits (102), Expect = 1e-13 Identities = 207/311 (67%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | ||||| ||||| || ||||| || || ||||| | | ||| Sbjct 174459 TTCGGTTTCAAGACACTGGAGCGTTCATACCTCCTCCGGATAAATGGACGCGTCGCTGAG 174518 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || || || ||| | ||||||||||| |||| || ||| | || ||||| | Sbjct 174519 CGTCCTCAACACATGATCATGCGTGTTGCGGTTGGCATTCATGGTGATGACATTGATCGC 174578 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATG 363570 | | || || ||||| ||| | || || ||||| || ||| |||| ||| | Sbjct 174579 GTCCTCGAGACGTATAACCTTATGTCTGAGCGCTACTTCACACATGCCTCGCCTACACTC 174638 Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630 | |||||| || || | | ||||| | || || || ||| | ||||||||| Sbjct 174639 TTCAATGCCGGTACACCCCACCCACAACTTAGCTCGTGTTTCCTTGTCTGTATGAAGGAC 174698 Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 ||||| ||||| ||||||| ||| || || ||| | ||||| | ||| ||||| ||| Sbjct 174699 GATTCAATCGATGGTATCTATGATACCCTCAAGCAGTGTGCCATGATTAGCAAGACTGCT 174758 Query 363691 GGCGGAATTGG 363701 || || ||||| Sbjct 174759 GGAGGTATTGG 174769 Score = 84.2 bits (92), Expect = 6e-11 Identities = 182/268 (68%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 364891 GACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTG 364950 |||| || || |||| ||| | |||||| ||| ||||| || || ||||| | Sbjct 176160 GACCTTGGCCTCTGGGATGATAACATGAARAACATGATCATTGCGCACAACGGTTCCATC 176219 Query 364951 CAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAAT- 365009 |||||||||||| | | || || || | ||| | || || || ||||| ||||| || Sbjct 176220 CAGAACATTCCAAGCATCCCTGACAATGTCAAGGCAATCTATAAGACCGTTTGGGAGATC 176279 Query 365010 TTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCA 365069 ||| ||| | || || | || || ||||| ||||| || ||||| |||||||| Sbjct 176280 AGCCAGAAGAA-GGTTATCGACCTCGCTGCTGATCGAGGTGCCTTCATCTGCCAGAGCCA 176338 Query 365070 GTCGTTTAACGTATTCATGACTCAGCCAAC-CTCCGCCAAGCTTACATCCATGCATTTCT 365128 | || || || | || ||| || || | | |||| ||| |||||| |||| Sbjct 176339 GAGTTTGAATGTCCACTTGCAGGCGCCGACGCTTGGTC-AGCTGACAAGCATGCACTTCT 176397 Query 365129 ACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| ||||| ||||| |||||||| Sbjct 176398 ACGGCTGGAAGAAGGGTCTCAAGACAGG 176425 >seq3 Length=1746238 Score = 116 bits (128), Expect = 1e-20 Identities = 158/217 (73%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTT-CATTCGC 22487 || ||| |||||| || ||||| || || ||||| |||| |||| | ||||||| Sbjct 1247429 ATCAAGCGTAAGGCTGAATGGGCCCTCAAGTGGATATCTGACAA-GAACTCTACATTCGC 1247371 Query 22488 GGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGC 22547 ||||| | | |||||||| | || |||||||| |||||||| || | ||| | Sbjct 1247370 CGAACGATTGGTCGCATTTGCAGCTGTGGAAGGCATCTTCTTTTCAGGCTCCTTTGCATC 1247311 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 |||||||||||| || || |||| | ||||| || |||| || ||||||||| | || Sbjct 1247310 AATCTTTTGGCTCAAGAAGCGTGGTCTGATGCCTGGCTTAACCTTCTCAAATGAGCTTAT 1247251 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || || ||||||||| | || ||||| || || ||| Sbjct 1247250 CAGTCGTGATGAGGGTATGCACACCGACTTCGCTTGT 1247214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303324342970064