Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq2 93.3 4e-14 >seq1 Length=1986796 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || ||||| | ||||| |||| |||||| | | Sbjct 634734 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTCTCGAGGTCGAGTCGTCC 634675 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | ||||| || || ||||| |||||||| |||||||||||| Sbjct 634674 GATACCATTGATAACGTCAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCCGATCAA 634615 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || ||| ||||| |||||||||| | | | || || || || Sbjct 634614 CAGCGCTTGATCTTCGCCGGGAAGCAGCTCGAAGATGGTCGCACCCTCTCAGACTACAAT 634555 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| ||||| || || Sbjct 634554 ATTCAGAAAGAGTCCAC 634538 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||| || || ||||| || | |||||| | || || ||| | Sbjct 635028 AATGCAAATCTTTGTAAAGACTTTGACTGGCAAGACCATTACCCTGGAGGTGGAGTCTTC 634969 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || ||||| || | |||||| ||||| ||||| ||||| || || ||||| || Sbjct 634968 TGATACCATTGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGGATCCCCCCCGACCA 634909 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAAC-GTCAGCGATTAT 24167 |||| | |||| | | |||||||||||| ||||| | | | || ||| || || Sbjct 634908 ACAGCGTTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACACTTTCA--GACTAC 634851 Query 24168 AACATTCAAAAAGAATCTACAATTCAT 24194 || ||||| || ||||| || ||||| Sbjct 634850 AATATTCAGAAGGAATCCACCCTTCAT 634824 >seq2 Length=1435055 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || |||| ||| |||||||||| || Sbjct 394821 ATGCAGATTTTCGTCAAGACTTTGACGGGCAAGACGATCACCCTCGAAGTCGAATCCTCT 394762 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||||| || || || || || ||||| |||||| Sbjct 394761 GACACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAA 394702 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGA--AACGTCAGCGATTATA 24168 || | ||||| | | |||||||| || || |||| | || | |||| ||||| | Sbjct 394701 CAACGTCTGATCTTTGCAGGCAAGCAGCTTGAGGATGGCCGAACATTGTCA--GATTACA 394644 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||| || ||||| || || Sbjct 394643 ACATACAGAAAGAGTCGAC 394625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926819791560