Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 seq2 96.9 3e-15 seq7 95.1 1e-14 >seq1 Length=1986796 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||||| |||||| || | ||| | |||||||| || || ||||||||||| | Sbjct 634229 CCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGAC 634288 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || ||||| || || || |||| || || || ||||| ||||| Sbjct 634289 AGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGA 634348 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||||||| ||||| | || | || |||| || || | Sbjct 634349 ATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACC 634408 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || || ||||| ||||| Sbjct 634409 TCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 >seq2 Length=1435055 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| ||||| ||||| ||| | ||||| ||||| || || ||||| Sbjct 394853 GTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGTTGTTTGCCA 394912 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||| || ||||| |||||||| || || || || || ||| |||| Sbjct 394913 GCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGCCTTG 394972 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | ||||||| |||| || | || || || || ||||| Sbjct 394973 ACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTGATAGTCTTGCCAGTAAGAGTC 395032 Query 131218 TTTACGAAAATCTGCATG 131235 || ||||||||||||||| Sbjct 395033 TTGACGAAAATCTGCATG 395050 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 |||||||| || || ||||||||||| || || || ||||| |||||||||||| Sbjct 394625 GTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGCTGCTTGCCT 394684 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTG-CTT 131156 || |||| | ||| || || || ||||| || || || || || ||| | | || ||| Sbjct 394685 GCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATC-CTGAATCTTTGCCTT 394743 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | || || | ||| |||| |||| ||| | || || || || | ||| Sbjct 394744 GACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCCGTCAAAGT 394803 Query 131217 TTTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 394804 CTTGACGAAAATCTGCAT 394821 >seq7 Length=1106505 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| |||||||| ||||||||||| || || Sbjct 360712 CCACCACGGAGACGAAGCACCAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTA 360771 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| | || | ||||||||||| |||||| Sbjct 360772 AGGGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGG 360831 Query 131128 AT 131129 || Sbjct 360832 AT 360833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002462919680