Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=1986796 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 16728 CCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCA 16787 ||| ||||| |||| |||||| || ||||||||||| | | || | |||| || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 16788 ATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA 16847 || ||||||||| | || || ||||| ||||| || | || || ||||| || Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAA 634139 Query 16848 --TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTT 16905 ||||| |||||| | | | | ||||| | |||| ||||| || || || || Sbjct 634140 TCTTTGC--CTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTT 634197 Query 16906 TCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||||||| || || ||||||||||| Sbjct 634198 GCCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 16706 TACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCG 16765 ||||| || || || | ||| || | ||||||||| ||||| || || |||||||| || Sbjct 634227 TACCC-CCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCA 634285 Query 16766 GCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACA 16825 | || || |||| || | ||||| || ||| | || | || |||||||| | Sbjct 634286 GACAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGA 634345 Query 16826 GGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 || | |||||| ||||| |||| | ||| || | | | |||||| | || Sbjct 634346 GGAATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCA 634405 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || |||||||| ||||||||||| ||||| Sbjct 634406 ACCTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405079350358480