Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 264 1e-65 >seq3 Length=1746238 Score = 264 bits (292), Expect = 1e-65 Identities = 399/562 (71%), Gaps = 13/562 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATTGCTGAATGTTA 93149 || || |||||||| || | ||| || || || ||||| | |||||| ||| |||| Sbjct 1247215 CAAGCGAAGTCGGTGTGCATACCCTCATCACGACTGATA--AGCTCATTTGAGAAGGTTA 1247272 Query 93150 AACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaa 93209 | || || | ||| || || |||||||||||||| ||||| ||||| || ||||| | Sbjct 1247273 AGCCAGGCATCAGACCACGCTTCTTGAGCCAAAAGATTGATGCAAAGGAGCCTGAAAAGA 1247332 Query 93210 aTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG- 93268 | || |||||||| ||||||||||| || | |||||||| || || || || || Sbjct 1247333 AGATGCCTTCCACAGCTGCAAATGCGACCAATCGTTCGGCGAA---TGTAGAGTTCTTGT 1247389 Query 93269 CTG--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 | | ||||| || | ||||| || || || ||| ||||| || | || ||||| | Sbjct 1247390 CAGATATCCACTTGAGGGCCCATTCAGCCTTACGCTTGATACAGGGGATGGTCTCGATGG 1247449 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 | | ||| || || || || || | || ||||| || || || | ||||| | Sbjct 1247450 CATCAAAAAGATACTCGCGTTCAGCTTGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGT 1247509 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 || |||| ||||| | || ||||| ||||| || || ||||| || | |||||| | Sbjct 1247510 ACGTTTCGGAATGAATGTTTTCCATCATGATTTGAAAACCATAGAAGCAGCGAGCTTCAG 1247569 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 | ||| ||||| | ||||| | || || || ||||| ||||| || |||||||| | Sbjct 1247570 CGGCCTGAACTTCGTTGGAAAAGCGTTCGACAAGGTTTTCGTTGACGATGCCATCGGAAG 1247629 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563 | |||||||| ||||| | |||| ||||| || ||||| || || | | | || Sbjct 1247630 CAGCAAAAAAGGCCAAAACATGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCAT 1247689 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||||||| ||| ||||| |||||||| | || ||| | ||||| || |||||||||| Sbjct 1247690 TCCAATCGTATATGTCTTTGGAAAGATCCATCTCCTCGGCCGTCCAGAAGGATGCTTCTG 1247749 Query 93624 CTTTTTTGTACATATCCCATAT 93645 | ||||||||||| | |||||| Sbjct 1247750 CCTTTTTGTACATCTGCCATAT 1247771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556848604748480