Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 163 5e-35 seq1 156 8e-33 seq94 127 4e-24 seq20 102 2e-16 >seq2 Length=1435055 Score = 163 bits (180), Expect = 5e-35 Identities = 163/210 (78%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 68253 ACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 |||||| || || || |||||||| || ||||| ||||| || | ||| | ||||| || Sbjct 394612 ACCAAGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTC 394671 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | |||||| || || || || || | |||||| || || ||||| || ||||| || || Sbjct 394672 AAGCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTG 394731 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||||||||||||||| ||||||||||| | ||||| ||||| | |||||| || || Sbjct 394732 AATCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTT 394791 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| | ||||||||||| |||||||| Sbjct 394792 GCCCGTCAAAGTCTTGACGAAAATCTGCAT 394821 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | || | ||| || || || || || || || || || |||||| Sbjct 394823 CCTCCTCTGAGCCGAAGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAG 394882 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | || || || ||||| || || | ||||||||| || || Sbjct 394883 AGAGTGCGGCCATCCTCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGG 394942 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| || |||||||| |||||||| || ||||| |||| ||| || || Sbjct 394943 ATGCCCTCCTTATCCTGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACC 395002 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || || ||||||||||| |||||||| Sbjct 395003 TCGAGAGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 395049 Score = 104 bits (114), Expect = 4e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || || ||||| |||||||| ||||| ||| ||||| ||||| | |||||| |||||| Sbjct 395219 CCCTCTTTGTCCTGAATCTTGGCCTTCACGTTGTCGATAGTGTCCGATGATTCAACTTCC 395278 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || ||||| ||||||||||| ||||||||| Sbjct 395279 AACGTGATCGTCTTCCCTGTGAGTGTCTTGACGAAGATCTGCATT 395323 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || ||||||||||||||||| |||||||| || |||||||||| || || ||||| Sbjct 395501 CCCTCCTTGTCTTGAATCTTAGCCTTGACATTATCAATGGTGTCTGAAGACTCGACTTCA 395560 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || ||||| ||||||||||| ||||| || ||||| Sbjct 395561 AGGGTGATTGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 395604 Score = 93.3 bits (102), Expect = 8e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || ||||| | || | || || || |||||||| || ||||| || || | Sbjct 395322 TTCCGCCACGCAGGCGGAGAACTAGATGGAGAGTAGACTCTTTCTGAATGTTGTAGTCAG 395381 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || |||||||| |||||||||||||| ||||| || || | |||||| || || | Sbjct 395382 AAAGCGTTCTCCCATCCTCTAACTGCTTCCCAGCGAAAATAAGGCGTTGTTGATCAGGGG 395441 Query 68353 GAAT 68356 |||| Sbjct 395442 GAAT 395445 >seq1 Length=1986796 Score = 156 bits (172), Expect = 8e-33 Identities = 162/211 (77%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 |||| || || | |||| ||| || |||||||| || || || || |||||||| |||| Sbjct 634017 TACCCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTT 634076 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | |||||| || || || || || | || ||||| || ||||| ||||||||||| | Sbjct 634077 CAAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCT 634136 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 ||||||||||||| ||| || || ||||| | ||| || |||||||| || || || | Sbjct 634137 GAATCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCT 634196 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || ||||| ||||| |||||||| Sbjct 634197 TGCCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 147 bits (162), Expect = 4e-30 Identities = 160/211 (76%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 ||||||| || || ||||||||||| || || || || || ||||| || | ||||||| Sbjct 634524 TACCAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTT 634583 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | ||||||||||||||| || | | ||||| ||||| || |||||||||||||| | Sbjct 634584 CGAGCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCT 634643 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 | || || ||||||||| || ||||| || | || || || || | || ||||| | Sbjct 634644 GGATTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCT 634703 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || | |||||||| || || ||||| Sbjct 634704 TTCCGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 122 bits (134), Expect = 2e-22 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 ||||||| || || ||||| || || || || || || || || ||||| | || |||| Sbjct 634817 TACCAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTT 634876 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | ||||| ||||| || || | | ||||||||||| || || ||||||||||||| Sbjct 634877 CAAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTT 634936 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 | ||||| || ||||| || ||||| || | || || || |||| ||| ||||| | Sbjct 634937 GGATCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCT 634996 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || || | ||||| || || || |||||| Sbjct 634997 TGCCAGTCAAAGTCTTTACAAAGATTTGCATT 635028 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || ||||||||||| ||||| || ||||| ||||||||||| | || || || || Sbjct 635206 CCCTCCTTGTCTTGGATCTTGGCTTTGACATTATCGATGGTGTCGGAAGACTCGACCTCA 635265 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTA 68468 | ||| ||||| ||||| || | ||| || ||||| || ||||| |||||| Sbjct 635266 AGGGTAATGGTCTTTCCGGTCAAGGTTTTCACGAAGATTTGCATGATGCTA 635316 >seq94 Length=248064 Score = 127 bits (140), Expect = 4e-24 Identities = 248/362 (69%), Gaps = 6/362 (2%) Strand=Plus/Minus Query 268370 ATTTTTCGGGTCACGAACGTCTCG-CCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCC 268428 || || || || || ||||| ||| || || |||||||||||||||| |||||||| || Sbjct 196450 ATCTTGCGCGTAACAAACGT-TCGACCGCGACGAGGGCTCTCGTGGTTAAAGAGGATCCC 196392 Query 268429 GTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACAT 268488 ||||| ||| |||| || || | ||| || ||||| ||||| |||| |||| | | Sbjct 196391 ATTGCAAGCGTACATCCCGTACGACTCGCGATAGTTGACGACGATCCAAAATGCGTAGAG 196332 Query 268489 CTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTC 268548 ||| ||| | || ||||| || || | |||||| ||||| |||| || | || Sbjct 196331 CTTGGCACAGCCATATGGAGAGCGAGGGTAGAAGGGTGTCGTCTCGCTTTGTGG--TGTC 196274 Query 268549 TCG--GACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCG 268606 ||| || || || | | ||||| || || || |||||||| | ||| ||| Sbjct 196273 TCGACAACCTTTCCGTATAATTCGGACGTGGACGCCTGGTAGAAGCGAATGTATTTCTCG 196214 Query 268607 AGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCT 268666 || || || | || | || || || | |||||| || || | ||| || ||||| | Sbjct 196213 AGCCCACAAGTGCGCACGGCATCAAGGAGACGAAGGGTACCAAGGCCGTCGACGTCTCCC 196154 Query 268667 GTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACC 268726 ||||| || | ||| ||||| || || | ||| || ||| || || || || || | | Sbjct 196153 GTATATTCTGCCATTTCGAAAGAAACTTTGACGTGCGACTGCGCACCGAGATTGTAGATC 196094 Query 268727 TC 268728 || Sbjct 196093 TC 196092 >seq20 Length=1067518 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| ||||| || |||||||| ||||||||||| | || || || || Sbjct 158414 CCTTCCTTGTCCTGAATTTTGGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCG 158473 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || || |||||||||||||||||||| |||||||| Sbjct 158474 AGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCAT 158517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921602216469440