Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 152 1e-31 >seq3 Length=1746238 Score = 152 bits (168), Expect = 1e-31 Identities = 359/532 (67%), Gaps = 15/532 (3%) Strand=Plus/Minus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 ||||||| || || || || || ||||| ||||| || ||||| | | | || | Sbjct 1247644 TGGCCTTTTTTGCTGCTTCCGATGGCATCGTCAACGAAAACCTTGTCGAACGCTTTTCCA 1247585 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | || || ||| | ||| || ||||||||||| || || || || || || ||| Sbjct 1247584 ACGAAGTTCAGGCCGCTGAAGCTCGCTGCTTCTATGGTTTTCAAATCATGATGGAAAACA 1247525 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGC 42600 | || || || |||| | || |||| |||| |||||| ||| | | || | Sbjct 1247524 TTCATTCCGAAACGTACTCT---CTCCTCATAGACACTTACATCAAGGACCAAGCTGAAC 1247468 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || || | ||||| ||||| || ||||| |||||| ||||| || |||| Sbjct 1247467 GCGAGTATCTTTTTGATGCCATCGAGACCATCCCCTGTATCAAGCGTAAGGCTGAATGGG 1247408 Query 42661 CGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACC 42719 | ||||| ||||| | | || | | || |||| ||| | |||| || ||| | Sbjct 1247407 CCCTCAAGTGGATATCT-GACAAGAACTCTACATTCGCCGAACGATTGGTCGCATTTGCA 1247349 Query 42720 GCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AA 42778 || || || ||||||||||| || ||| |||| || || ||||| ||||||||| || Sbjct 1247348 GCTGTGGAAGGCATCTTCTTTTCAGGCTCCTTTGCATCAATCTTTTGGCTCAAGAAGCGT 1247289 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 ||| | |||||| || | |||||||| || || || ||||| | || ||||| |||| Sbjct 1247288 GGTCT-GATGCCTGGCTTAACCTTCTCAAATGAGCTTATCAGTCGTGATGAGGGTATGCA 1247230 Query 42839 TAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGC 42897 | ||||| || || || || ||| || ||||||| || |||||| || Sbjct 1247229 CACCGACTTCGCTTGTCTTCTCTTC---AGTCACCTCAAGC-GTCGCCCTCATCCCGATA 1247174 Query 42898 GGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 || |||| || ||||| || || || | |||||| ||||||||||||| Sbjct 1247173 CAATCAGGGCTATTATCACAGAAGCAGTTGCAATCGAGCAGGAGTTCCTCAC 1247122 Score = 125 bits (138), Expect = 1e-23 Identities = 258/383 (67%), Gaps = 3/383 (1%) Strand=Plus/Plus Query 42500 TGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTA 42559 |||||| || ||||||||||||||||| || || || || || ||||| || ||| Sbjct 1249123 TGAGGCACGTTGCTTCTACGGCTTCCAAATTATGATGGAAAATGTTCACTCGGAAACGTA 1249182 Query 42560 CGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGC 42619 | | ||| || | || |||||| |||||| | || || | || ||| | || Sbjct 1249183 CTCTTTACTTATCGATACCTACATCAAGGATCCAGAAGAACGCACACATCTTTTCGACGC 1249242 Query 42620 CATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAG 42679 ||| || || || | || | ||| || || || ||||| |||| ||||| | Sbjct 1249243 CATCGAAACCATCTCATGTGTTAAGCGTAAAGCTGATTGGGCTCTCAGATGGATATCGGA 1249302 Query 42680 TCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTT 42739 || | | || || | || | || || || || |||| || || || ||||| || Sbjct 1249303 TCAACAGTCCACTTTTGCTGAACGACTCGTTGCTTTCGCCGCTGTAGAAGGGATCTTTTT 1249362 Query 42740 CTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCAC 42799 ||| || | || || | ||||||||| ||||| || || | ||||| || || || Sbjct 1249363 CTCTGGGTCTTTTGCTGCTATCTTCTGGATCAAGAAGCGGGGATTAATGCCTGGTCTTAC 1249422 Query 42800 CTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCT 42859 ||||| || |||||||||||| | |||||||| || || | ||| ||||| || || | Sbjct 1249423 GTTCTCCAATGAACTCATCAGCCGCGACGAGGGCCTTCACACGGATTTTGCATGTCTGTT 1249482 Query 42860 GTTCTCGAGCCACCTCAGGCACA 42882 |||| | | | ||||||| || Sbjct 1249483 GTTC---ACCTATCTCAGGCGCA 1249502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944318518971520