Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 123 3e-23 seq21 96.9 4e-15 >seq3 Length=1746238 Score = 123 bits (136), Expect = 3e-23 Identities = 290/434 (67%), Gaps = 8/434 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| || |||||||| ||| |||||||||||| ||||| || || Sbjct 1249473 GCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGGAGAACGTAAGACCA 1249414 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | ||||||||||| | |||||| || ||| ||| || || ||||| ||||| Sbjct 1249413 GGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACCCAGAGAAAAAGATC 1249354 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---A 126223 || || ||| ||||| |||| ||| || |||||||| | | |||| | || Sbjct 1249353 CCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTG---GACTGTTGATCCGAT 1249297 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | ||| | | ||||| | || || || | ||| | || ||| | ||| || || Sbjct 1249296 ATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTTCGATGGCGTCG 1249237 Query 126284 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343 || || | | |||| |||||| |||||||| |||| || ||| || || ||| Sbjct 1249236 AAAAGATGTGTGCGTTCTTCTGGATCCTTGATGTAGGTATCGATAAGTAAAGAGTACGTT 1249177 Query 126344 TCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 126402 || ||| || ||| ||| || || | ||||||| | || || || ||| Sbjct 1249176 TCCGAGTGAACATTTTCCATCAT-AATTTGGAAGCCGTAGAAGCAACGTGCCTCAGCTAT 1249118 Query 126403 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 126462 ||||| ||| | ||| | | | || ||||||| || || || ||||| |||| Sbjct 1249117 CTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGCCGTCGGAAGCAGC 1249058 Query 126463 AAAAAACGCCAGGA 126476 |||||| || |||| Sbjct 1249057 AAAAAATGCGAGGA 1249044 >seq21 Length=1130388 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||| |||||||||||| | || || ||||| |||||| || |||||| || | | Sbjct 175355 GCATCTTTGTAAAGCATGAAAGGTCCTCCTGTCTCTATTTGGGCCTCGAGAATCGCGTAC 175296 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 |||| | || | | | || ||| ||||| || ||| | |||||| || ||| | Sbjct 175295 CAGAGCTTCTGAG-CAGGAACAACCTTCTTGGCACGTTTCTCATTCTCGTATTTCGTGAA 175237 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 ||| || ||||||||| | || | | || | || ||||| || | | |||||||| Sbjct 175236 GAGTGCCTCAAACTCTGCGCCATGGACGTCGGCAAGTCCTGGGGCTTCGTTAGGGCAGAA 175177 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 ||| | ||| | ||||||| |||| || ||| ||||| Sbjct 175176 GAGTGGCCAGTCACCACCCGCCTCGACGCGCCTCATG 175140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340517956160