Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=1986796 Score = 118 bits (130), Expect = 1e-21 Identities = 153/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42001 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 42060 ||| |||||| ||||||||||| || || ||||| |||| || |||| | |||| || | Sbjct 634020 CCAGATGCAACGTGCTCTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAA 634079 Query 42061 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGA 42120 ||||||| || || || || || ||||||||||| | || | | ||||||||| ||| Sbjct 634080 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCC-TGA 634138 Query 42121 TTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 | |||| | ||| | | | |||||| || ||||| || | ||| || || ||| Sbjct 634139 ATCTTTGCCTTCACGTTGTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTG 634198 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || |||||||| || || || ||||| Sbjct 634199 CCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 42000 ACCAA-ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| ||| | ||| ||| || ||||||||||| || | || || || | || || Sbjct 634525 ACCAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTC 634584 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| || | ||||| || |||| || | || ||||||||| Sbjct 634585 GAGCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTG 634644 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 |||||| |||| | | | || ||| ||| || || |||| || ||||| || Sbjct 634645 GATTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTT 634704 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| |||||||||||||| Sbjct 634705 TCCGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||||||||| || | || || || |||| || || ||||| || || || Sbjct 634837 TCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCAAAG 634896 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||| ||||||| || | | |||||||| ||| || ||||| | Sbjct 634897 ATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTG 634956 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || || || ||||| || | || ||||| ||||| || | ||||||||| Sbjct 634957 TCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCCAGTCAAAGTCTTTACA 635016 Query 42198 AAGATTTGCATT 42209 |||||||||||| Sbjct 635017 AAGATTTGCATT 635028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543200903639680