Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq2 120 3e-22 seq7 87.8 2e-12 >seq1 Length=1986796 Score = 138 bits (152), Expect = 1e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||||| || ||||| || ||||| ||||| |||| | ||||| |||||||||| Sbjct 634822 AGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTCAAGT 634881 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||||||| | || | ||||| |||||||| || || ||||| || ||||| | | Sbjct 634882 TGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTGGA-T 634940 Query 64358 TTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCC 64416 || ||||| ||| || | |||||| | ||||| || | || | ||||||||| Sbjct 634941 CTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTTGCC 635000 Query 64417 GGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||||| ||||| || ||||||||| Sbjct 635001 AGTCAAAGTCTTTACAAAGATTTGCATT 635028 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||||| | || || ||||| | |||||| ||||| || ||||||||||| | Sbjct 634228 ACCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGA 634287 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| ||||||||||||| || |||||| | || | || || ||||| ||||| Sbjct 634288 CAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGG 634347 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || ||||| ||| ||| || | || || | || || Sbjct 634348 AATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAAC 634407 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || || ||||||||||| Sbjct 634408 CTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | || || ||||| ||||| ||||| |||| || |||||| | ||||| ||| Sbjct 634529 AGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTCGAGC 634588 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| ||||| | || | ||||| || |||||||| || ||||| || || || ||| Sbjct 634589 TGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGATT 634648 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| || || | ||||| | || || || | ||| | |||||| ||| Sbjct 634649 TTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTCCG 634708 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| || || || |||||||| Sbjct 634709 GTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 105 bits (116), Expect = 7e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | | || | | ||||||||||||||||||| ||| | Sbjct 634037 TCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAAG 634096 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||||||||| || ||||| ||||| || || || || ||| ||| || Sbjct 634097 ATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTG 634156 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | |||||||| | || | ||||||||||||| || || ||| Sbjct 634157 TCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCACG 634216 Query 64433 AAAATTTGCAT 64443 ||||| ||||| Sbjct 634217 AAAATCTGCAT 634227 >seq2 Length=1435055 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | ||||| ||||| || ||||||||||||| | || || | || |||||| Sbjct 394616 AGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAAGC 394675 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| ||| | || || || || || || |||||||| || || || || || || Sbjct 394676 TGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAATC 394735 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 ||| ||| ||| || | || ||| || || ||||| | || | |||||||| Sbjct 394736 TTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGCCC 394795 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| || |||||||| ||||| Sbjct 394796 GTCAAAGTCTTGACGAAAATCTGCAT 394821 >seq7 Length=1106505 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || |||| || || || || ||||||||||| || | ||| || | || Sbjct 360726 AAGCACCAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTAAGGGTACGGCCATC 360785 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||||||||||||||||| |||| || ||||||||||||||||| || Sbjct 360786 CTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGAT 360833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499633857778880