Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 seq2 114 1e-20 >seq1 Length=1986796 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||| || | ||| | ||| |||||||| || || |||||||| | Sbjct 634229 CCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGAC 634288 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||||||||| || ||||||| || || || || ||||| Sbjct 634289 AGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGA 634348 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||||||| ||||| | || | ||||| | | || || Sbjct 634349 ATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACC 634408 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || ||||| ||||| || || |||||||| ||||| Sbjct 634409 TCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 Score = 127 bits (140), Expect = 2e-24 Identities = 155/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | || |||||||| ||||||||||| || | |||||| ||| || Sbjct 634525 ACCAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTC 634584 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| ||||||| ||||| ||||||||||| ||||| ||||||||| Sbjct 634585 GAGCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTG 634644 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| ||||| | || | ||| || | |||||| |||| || | || || Sbjct 634645 GATTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTT 634704 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| ||| || ||||| || ||||| Sbjct 634705 TCCGGTCAAAGTCTTGACAAAGATTTGCAT 634734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/157 (74%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||||| |||||||| || || || || || |||||| Sbjct 634073 TCTTCAAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTG 634132 Query 127019 TCCGTGATTTTCTGC-TTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 ||| ||| | | ||| || | ||||| | | ||||||| ||| ||||| | || | Sbjct 634133 TCC-TGAATCTTTGCCTTCACGTTGT-CAATCGTGTCCGATGACTCCACTTCCAACGTAA 634190 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||||||||| || || || ||||||||||| Sbjct 634191 TCGTCTTGCCGGTCAGCGTCTTCACGAAAATCTGCAT 634227 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | || || || || ||||||||||| || | |||||| || || Sbjct 634818 ACCAAGATGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAAAGTGTGCGACCGTCTTC 634877 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || || || || || ||||||| ||||| || ||||| || || || |||||||| Sbjct 634878 AAGTTGCTTGCCGGCAAAGATCAAACGCTGTTGGTCGGGGGGGATCCCTTCCTTGTCTTG 634937 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || |||| | || | ||| || | | ||| || || | ||| | || || Sbjct 634938 GATCTTGGCTTTGACATTGTCAATGGTATCAGAAGACTCCACCTCCAGGGTAATGGTCTT 634997 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| |||| ||| |||||||| || ||||| Sbjct 634998 GCCAGTCAAAGTCTTTACAAAGATTTGCAT 635027 >seq2 Length=1435055 Score = 114 bits (126), Expect = 1e-20 Identities = 155/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 126904 CACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGT 126962 |||||| ||| | || |||||||| || || |||||||| || || || ||| | Sbjct 394611 CACCAAGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCT 394670 Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022 | ||||| || || || |||||| || || ||||| ||||| || |||||||| ||| Sbjct 394671 CAAGCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCC- 394729 Query 127023 TGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||| | | ||| |||| | |||| |||||| | |||||||||| ||| | ||| Sbjct 394730 TGAATCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTC 394789 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| |||| ||| || || ||||||||||| Sbjct 394790 TTGCCCGTCAAAGTCTTGACGAAAATCTGCAT 394821 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || ||||||||||| ||| | ||||| ||| || || ||||| ||| Sbjct 394853 GTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCATCCTCGAGTTGTTTGCCA 394912 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || || || || ||||| ||||||||||| ||| || ||| |||| Sbjct 394913 GCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTCGCCTTG 394972 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| || | |||||| |||| || | || ||||| || ||||| Sbjct 394973 ACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTGATAGTCTTGCCAGTAAGAGTC 395032 Query 127097 TTTACAAAAATCTGCATG 127114 || || |||||||||||| Sbjct 395033 TTGACGAAAATCTGCATG 395050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475490386532480