Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq2 95.1 1e-14 >seq1 Length=1986796 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | || || ||||||||||| || || || ||||| || ||||| Sbjct 634226 ATACCCCCGCGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCA 634285 Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | || || || | |||||||| || | ||||| ||||| ||||| | Sbjct 634286 --GACAGAGTGCGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAG 634343 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | |||||||| || || || || ||||| |||| || | ||||||||||| | Sbjct 634344 GAGGAATGCCCTCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATT 634403 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| || | || ||||| || || || || |||||||||||||| Sbjct 634404 CAACCTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTGCAT 634455 >seq2 Length=1435055 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCA 45192 |||||||| || || || || || || || ||||| |||| | || | ||| || | Sbjct 394616 AGATGCAGAGTCGACTCTTTCTGTATGTTGTAATC--TGACAATGTTCGGCCATCCTCAA 394673 Query 45193 ATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAA 45252 || || ||||| | |||| ||||| || || || ||||| || || ||||| |||| Sbjct 394674 GCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAA 394733 Query 45253 TTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGC 45312 | ||| |||| || | |||||| || || ||||||||||| || | ||| |||| Sbjct 394734 TCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGC 394793 Query 45313 CGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || | ||| || || ||||| ||||| Sbjct 394794 CCGTCAAAGTCTTGACGAAAATCTGCAT 394821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451993301129920