Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 138 3e-27 seq2 122 2e-22 seq20 84.2 5e-11 >seq1 Length=1986796 Score = 138 bits (152), Expect = 3e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| |||| ||||||||||| | ||||| || ||||| |||||||| || || || Sbjct 634036 CTCCTTCTGGATGTTGTAGTCAGAAAGCGTCCTCCCGTCTTCAAGCTGCTTGCCCGCAAA 634095 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 ||| || ||||||||||| || ||| ||||| |||||||||||| ||||||| Sbjct 634096 GATCAGGCGCTGCTGGTCAGGCGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTCACGTT 634155 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || | ||||| | || || || |||||||| |||||||| || || || || ||||| Sbjct 634156 GTCAATCGTGTCCGATGACTCCACTTCCAACGTAATCGTCTTGCCGGTCAGCGTCTTCAC 634215 Query 199618 AAAAATTTG 199626 ||||| || Sbjct 634216 GAAAATCTG 634224 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || || |||||||| || |||| |||||| |||| || ||| Sbjct 634235 CGCAGACGCAGAACGAGATGCAGCGTCGACTCTTTCTGGATGTTGTAATCAGACAGAGTG 634294 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| ||||| |||||||| ||||| | || || ||||| ||| ||| || Sbjct 634295 CGACCGTCTTCAAGCTGTTTTCCGGCAAAGATCAAGCGTTGTTGGTCAGGAGGAATGCCC 634354 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| || || ||| || || | ||||| | | ||| || || | | Sbjct 634355 TCCTTGTCCTGGATTTTCGCCTTGACATTATCAATCGTGTCGGAAGATTCAACCTCGAGC 634414 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || || ||||||||||| Sbjct 634415 GTGATGGTCTTGCCCGTCAGCGTCTTGACAAAAATTTG 634452 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| ||||| || ||||| || || | |||||||| | | || | |||||||| | Sbjct 634527 CAAGATGGAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGGGTGCGACCATCTTCGA 634586 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| ||||||||||| | ||||| || || ||| || ||||| ||||| | Sbjct 634587 GCTGCTTCCCGGCGAAGATCAAGCGCTGTTGATCGGGAGGGATGCCTTCCTTGTCCTGGA 634646 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 | || ||| ||| || | ||| || | | || || || | || || ||||| | Sbjct 634647 TTTTGGCCTTGACGTTATCAATGGTATCGGACGACTCGACCTCGAGAGTAATGGTCTTTC 634706 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | ||| || ||||| ||||| Sbjct 634707 CGGTCAAAGTCTTGACAAAGATTTG 634731 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| | || || ||||| |||| ||| ||||| | | || | |||||| Sbjct 635044 AGCACAAGGTGCAAGGTGGATTCCTTCTGGATGTTATAGTCGGAAAGCGTGCGGCCATCT 635103 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || ||||| || || ||||||||||||||||||||||| ||| Sbjct 635104 TCGAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCAGGA 635145 >seq2 Length=1435055 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || ||||||||||| || || | |||||| || | ||| || | ||||| || | Sbjct 394614 CAAGATGCAGAGTCGACTCTTTCTGTATGTTGTAATCTGACAATGTTCGGCCATCCTCAA 394673 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || || ||||| ||||| || || || ||| ||| || || ||||||| Sbjct 394674 GCTGCTTGCCTGCAAAGATCAGACGTTGTTGATCAGGAGGAATACCCTCCTTATCCTGAA 394733 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 ||||| ||| || |||| |||||| | | ||| || || | ||||||||||| | Sbjct 394734 TCTTTGCCTTGACATTATCGATGGTGTCAGAGGATTCGACTTCGAGGGTGATCGTCTTGC 394793 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 |||| | ||| || || ||||| || Sbjct 394794 CCGTCAAAGTCTTGACGAAAATCTG 394818 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || || ||||| || | |||||||| | | ||| | ||||| Sbjct 394838 AGGACAAGGTGAAGTGTAGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGGCCATCC 394897 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || |||||||| ||||| || ||||| ||| || || || ||| Sbjct 394898 TCGAGTTGTTTGCCAGCGAAGATAAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTATCC 394957 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | ||| |||| || || || || | ||||| ||| Sbjct 394958 TGAATCTTCGCCTTGACATTGTCAATGGTATCTGATGACTCGACCTCGAGAGTGATAGTC 395017 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || ||||| || Sbjct 395018 TTGCCAGTAAGAGTCTTGACGAAAATCTG 395046 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || ||||| ||||| |||| || ||||| | | || || ||||| Sbjct 395066 AGGACAAGATGCAGGGTCGATTCCTTCTGGATATTATAGTCGGAGAGTGTTCTACCATCC 395125 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || ||||| || ||||| |||||||||||||| ||||| ||| Sbjct 395126 TCAAGCTGTTTGCCGGCAAAGATGAGACGCTGTTGGTCGGGA 395167 >seq20 Length=1067518 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || ||||||||||| || | |||||||||| || ||| | ||||| Sbjct 158256 AGGACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCC 158315 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || || ||||||||||| ||||| | ||| || ||||| || Sbjct 158316 TCAAGTTGCTTTCCGGCAAAGATCAAACGTTGTTGGTCAGG 158356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178895136157384