Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20JCM_2013351_20[genbank_20GCA_5F001972325.1_2020 16-12-09] 1,752 sequences; 91,816,091 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 217 1e-51 seq1 125 7e-24 seq2 84.2 2e-11 >seq3 Length=1746238 Score = 217 bits (240), Expect = 1e-51 Identities = 382/552 (69%), Gaps = 11/552 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 ||||| |||||| |||| ||||| || | || || || || ||| || ||| Sbjct 1247215 CAAGCGAAGTCGGTGTGCATACCCTCATCACGACTGATAAGCTCATTTGAGAAGGTTAAG 1247274 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||||| || || || || ||||||||||| || | || || ||| ||||||||| Sbjct 1247275 CCAGGCATCAGACCACGCTTCTTGAGCCAAAAGATTGATGCAAAGGAGCCTGAAAAGAAG 1247334 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCG 133074 | ||| || || || || || || |||| || ||| |||| || | | ||| | Sbjct 1247335 ATGCCTTCCACAGCTGCAAATGCGACCAATCGTTCGGCGAATGTAGAGTTCTTGTCAGAT 1247394 Query 133075 ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTC 133134 ||||| || |||||||| ||||| |||| || || || || |||||||| | Sbjct 1247395 ATCCACTTGAGGGCCCATTCAGCCTTACGCTTGATACAGGGGATGGTCTCGATGGCAT-- 1247452 Query 133135 AACAAACGGAGTTTCTC-TTCCGA--GGAACGC-ACGTAGGTGTCGATGAGGGTCGAATA 133190 |||| || || | ||| | || | | ||| ||||| |||||| || || Sbjct 1247453 --CAAAAAGATACTCGCGTTCAGCTTGGTCCTTGATGTAAGTGTCTATGAGGAGAGAGTA 1247510 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 | |||| || || | ||| ||||| ||||||||| || || ||||| || || || | Sbjct 1247511 CGTTTCGGAATGAATGTTTTCCATCATGATTTGAAAACCATAGAAGCAGCGAGCTTCAGC 1247570 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 |||| ||||| | | || || ||||| || ||||||||||||||||| ||| || Sbjct 1247571 GGCCTGAACTTCGTTGGAAAAGCGTTCGACAAGGTTTTCGTTGACGATGCCATCGGAAGC 1247630 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC--- 133367 || |||||||||| || ||| ||| || |||||||| ||||| || | ||| || Sbjct 1247631 AGCAAAAAAGGCCAAAACATGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATT 1247690 Query 133368 CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 ||| ||| |||| ||||| || |||| ||||||| | ||||| || || || || || Sbjct 1247691 CCAATCGTATATGTCTTTGGAAAGATCCATCTCCTCGGCCGTCCAGAAGGATGCTTCTGC 1247750 Query 133428 TTTTTTGTACAT 133439 ||||||||||| Sbjct 1247751 CTTTTTGTACAT 1247762 Score = 141 bits (156), Expect = 9e-29 Identities = 318/473 (67%), Gaps = 6/473 (1%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| || || ||||| || || | ||||||||| | | |||||||| ||| Sbjct 1249487 TGAACAACAGACATGCAAAATCCGTGTGAAGGCCCTCGTCGCGGCTGATGAGTTCATTGG 1249428 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | || ||||| | || || || |||| ||| || || || || ||| | Sbjct 1249427 AGAACGTAAGACCAGGCATTAATCCCCGCTTCTTGATCCAGAAGATAGCAGCAAAAGACC 1249368 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || || |||| || || || || |||||||| || || || || | || |||| | Sbjct 1249367 CAGAGAAAAAGATCCCTTCTACAGCGGCGAAAGCAACGAGTCGTTCAGCAAAAGTGGACT 1249308 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 || | ||||| | || ||||| || || || || || || | || |||| Sbjct 1249307 GTTGATCCGATATCCATCTGAGAGCCCAATCAGCTTTACGCTTAACACATGAGATGGTTT 1249248 Query 133124 CGATGGCGTTCAACAAACG-GAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGA 133180 ||||||||| || | | | | | | ||||| | || | | |||||| ||||| | Sbjct 1249247 CGATGGCGTCGAAAAGATGTGTGCGT-TCTTCTG--GATCCTTGATGTAGGTATCGATAA 1249191 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 | || ||| |||||||||| || || ||||| ||||| |||||||| ||||| | Sbjct 1249190 GTAAAGAGTACGTTTCCGAGTGAACATTTTCCATCATAATTTGGAAGCCGTAGAAGCAAC 1249131 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | ||||| | | ||| | ||| || || | ||| | ||||| || || ||||||| Sbjct 1249130 GTGCCTCAGCTATCTGTATTTCACTAGAAAACCTCTCAAGGAGATTCTCATTCACGATGC 1249071 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTG 133353 ||||| || || ||||| || || ||||| ||||||| || |||||| Sbjct 1249070 CGTCGGAAGCAGCAAAAAATGCGAGGACGTGGGAAATGAAATATCGTTCGTTG 1249018 >seq1 Length=1986796 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || ||||| |||||||| |||||||| |||| || || | || Sbjct 634455 ATGCAAATTTTTGTCAAGACGCTGACGGGCAAGACCATCACGCTCGAGGTTGAATCTTCC 634396 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | ||||||| ||||| ||||| ||||| | ||||| Sbjct 634395 GACACGATTGATAATG-TCAAGGCGAAAATCCAGGACAAGGAGGGCATTCCTCCTGACCA 634337 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || |||||||| || |||| ||||| || || ||||| Sbjct 634336 ACAACGCTTGATCTTTGCCGGAAAACAGCTTGAAGACGGTCGCACTCTGTCTGATTACAA 634277 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| || || ||||||||||| | || |||||| || | || || Sbjct 634276 CATCCAGAAAGAGTCGACGCTGCATCTCGTTCTGCGTCTGCGCGGGGG 634229 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || || || | || || ||| | | Sbjct 634227 ATGCAGATTTTCGTGAAGACGCTGACCGGCAAGACGATTACGTTGGAAGTGGAGTCATCG 634168 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||| || | ||||| || || ||||| | ||||| Sbjct 634167 GACACGATTGACAACG-TGAAGGCAAAGATTCAGGACAAGGAAGGGATTCCGCCTGACCA 634109 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | |||||||| ||||| || |||| | | || || |||||||| Sbjct 634108 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTTGAAGACGGGAGGACGCTTTCTGACTACAA 634049 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGG 38451 |||||| ||||| ||| ||| ||||| ||| Sbjct 634048 CATCCAGAAGGAGAGC-ACGTTGCATCTGG 634020 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || ||||| || | || ||||| ||||| ||| | || || ||| | | Sbjct 635028 AATGCAAATCTTTGTAAAGACTTTGACTGGCAAGACCATTACCCTGGAGGTGGAGTCTTC 634969 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | | | |||| || |||| ||||| || || || ||| ||||||| Sbjct 634968 TGATACCATTGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGGATCCCCCCCGACCA 634909 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || ||||| || || || |||| ||||| || |||||||| Sbjct 634908 ACAGCGTTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACACTTTCAGACTACAA 634849 Query 38423 CATCCAAAAGGAAGCGACGCTGCAT-TTGGT 38452 || || |||||| | || || ||| ||||| Sbjct 634848 TATTCAGAAGGAATCCACCCTTCATCTTGGT 634818 >seq2 Length=1435055 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 ||||||||||||| ||||| | || ||||||||||| || || | | || ||| || Sbjct 395165 CCGACCAACAGCGTCTCATCTTTGCCGGCAAACAGCTTGAGGATGGTAGAACACTCTCCG 395106 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||| || ||||| |||||| |||| |||||| | || || || || | |||||| Sbjct 395105 ACTATAATATCCAGAAGGAATCGACCCTGCATCTTGTCCTTCGCCTGCGTGGCGGC 395050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500161846215680